Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 82/307 (26%), Positives = 137/307 (44%), Gaps = 19/307 (6%)

Query: 9   LTAAMLAATFSF--SSLAADLEK-IHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQ 65
           + AA+ A +FS   ++LAA  +K I  ++   AGG  D  AR   D L    ++G     
Sbjct: 5   IRAALAALSFSLGTAALAAYPDKPIKLVIGFPAGGPLDQHARLLTDKLQA--VLGQPIII 62

Query: 66  NLSGGGGGKAIAHLIETADRQQDTLMINSTPIVI--RSLSGVFPQSF-RDLTPVAEIVSD 122
           +   G GG   A  +  +     TLM+ +T + +   +L    P +  RD  P+A     
Sbjct: 63  DYKPGAGGSVGADAVAKSPADGYTLMLANTGVAVINGALYSKLPYNTQRDFVPIARTAMQ 122

Query: 123 YGAFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVR 182
             A +V       +  Q +   KA P Q+   G +  G + HLV        G+    + 
Sbjct: 123 PLALLVTPKLPVQNLRQFIDYAKARPGQVNY-GSAGNGGISHLVPEMFKTATGIF---MV 178

Query: 183 YVAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLAD 242
           ++ Y     A T L+ G+ Q ++  + +     K G+VR LA+TS +R    PD+PT+ +
Sbjct: 179 HIPYRGSAPAFTDLMGGQVQFMAESIPQAANYHKQGKVRALAVTSRERNPALPDVPTVIE 238

Query: 243 YG-NPTTFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDR---NGWIDSYKGD 298
            G      V + G+ A      + VA+  + F+++  + E   +RDR    G   +Y G 
Sbjct: 239 SGVKGFEVVGFYGFLAPKDTPKDVVAKLGDAFRQVLNNPE---VRDRMVSQGADPAYLGS 295

Query: 299 KEFYAFL 305
           ++F  FL
Sbjct: 296 EDFARFL 302