Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) from Variovorax sp. SCN45

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 73/305 (23%), Positives = 128/305 (41%), Gaps = 12/305 (3%)

Query: 9   LTAAMLAATFSFSSLAADLEKIHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQNLS 68
           L A ++ A  + S+     + I F+VP    G  D+ AR  G+ L +A  +G     +  
Sbjct: 8   LAAGLVLAASAASADTWPSKPITFVVPTAPAGSTDIMARLVGEPLQRA--LGQPVVVDNK 65

Query: 69  GGGGGKAIAHLIETADRQQDTLMINSTPIVIRSLSGVFPQ----SFRDLTPVAEIVSDYG 124
            G  G   A  +  A     TL++  +   + + S ++P       +D  PVA ++    
Sbjct: 66  PGASGNIGAEFVARAAPDGYTLLMQYSGYHVGNPS-LYPNLKWSPTKDFVPVAMVMRAPH 124

Query: 125 AFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYV 184
              V+G     S ++++   K     +  A  S  GS+ H+      +      + + +V
Sbjct: 125 VVAVSGKLPVKSMKELIEYGKKKEGGLFYAS-SGNGSIQHIAGELLSRQS---KQAMTHV 180

Query: 185 AYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADYG 244
            Y   G A+  L++G   +  T    V+    +G+++ LA T  KR    PD+PT A+ G
Sbjct: 181 PYKGSGPAINDLIAGNVDMFITTPPSVIGHFATGRIKALAYTGSKRHPSMPDVPTSAEAG 240

Query: 245 NPTTFV-NWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDRNGWIDSYKGDKEFYA 303
            P   V +W   FA      E VA  +   KK+  SE ++   D  G   +Y        
Sbjct: 241 LPGYEVESWFAVFAPAKTPPEVVARLSAEIKKIVESEAFRKKVDEQGAFATYMDSPTLAK 300

Query: 304 FLEEQ 308
           F++++
Sbjct: 301 FVDQE 305