Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 80.1 bits (196), Expect = 7e-20
 Identities = 74/263 (28%), Positives = 116/263 (44%), Gaps = 14/263 (5%)

Query: 11  AAMLAATFSFSSLAADLEK-IHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQNLSG 69
           AA LAAT +   + A  ++ +  +V    GG  D+ AR   +  M+  L  N    N  G
Sbjct: 11  AAALAATAAAPLVFAQQDRTVRILVGFPPGGSVDVVARVLAEK-MRVSLGQNVIIDNKPG 69

Query: 70  GGGGKAIAHLIETADRQQDTLMINSTPIVIRSLSGVFPQ----SFRDLTPVAEIVSDYGA 125
             G  A+  L   A          S  +VI     ++P       +D TP+A + S +  
Sbjct: 70  AAGRLALGELRRAAPDGHTLAFSPSGAMVIHPW--LYPNLGYDPAKDFTPIA-LGSTFDF 126

Query: 126 FVVAGDSKYTS-WEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYV 184
            V AG        + V+A  KANP +   A   A G++ H       +  G+    + +V
Sbjct: 127 AVTAGPGAPPGDLKTVLAWMKANPAKANYATSGA-GTVPHFAGQLIAQAAGVP---MTHV 182

Query: 185 AYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADYG 244
           AY  G  A   L+ G+  ++     E +E  ++G+VR+LA+T  +R    PD+PTL + G
Sbjct: 183 AYRGGAPAAQDLIGGQVPLMVDTASETIEHHRAGKVRILAVTGEQRSRALPDVPTLKEAG 242

Query: 245 NPTTFVNWRGYFAAPGVSAEKVA 267
              T   + G +  PG+  E VA
Sbjct: 243 INVTADAFFGLYGPPGMQPELVA 265