Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 90.9 bits (224), Expect = 4e-23
 Identities = 82/315 (26%), Positives = 145/315 (46%), Gaps = 16/315 (5%)

Query: 11  AAMLAATFSFSSLAADLEKIHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQNLSGG 70
           AA+L AT ++++ A   + +  +V    GG  D+ AR     L  A+ +G         G
Sbjct: 17  AALLGATQTWAADAFPTKPVKILVGFSPGGSNDVVARLIAPKL--AEGLGQQVLVENRPG 74

Query: 71  GGGKAIAHLIETADRQQDTLMINST------PIVIRSLSGVFPQSFRDLTPVAEIVSDYG 124
            GG   A  +  A     TL++ +T      P +++S+    P+  +D+ PV ++V+   
Sbjct: 75  AGGNIAASAMLGAPADGHTLLMCTTGTLSIQPHILKSMP-FDPE--KDIVPVTQVVNAPY 131

Query: 125 AFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYV 184
             +V       + +++VA  K  P +I  A  S  G+  HL         G+D   + +V
Sbjct: 132 MLLVNATLPVKNVKELVAYAKQKPGEINFAS-SGTGTGGHLAGEMLKSRAGID---IVHV 187

Query: 185 AYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADYG 244
           AY   G AMT L++G+  ++       ++ +++G++R LA+ SP+RL   PDIPT+ + G
Sbjct: 188 AYKGTGQAMTDLIAGQVSMIFDQPVSSMQYARAGKLRALAVASPRRLAAFPDIPTVTEAG 247

Query: 245 NPT-TFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDRNGWIDSYKGDKEFYA 303
            P    V W G  AA       VA       K+ A  +       +G        ++F A
Sbjct: 248 VPDFDPVTWAGICAAKNTPPAVVARIQREVAKVLAMPDIAKRLAADGLEPVGSTPEQFRA 307

Query: 304 FLEEQEKQMGDLMRE 318
           FL   +++ G ++++
Sbjct: 308 FLAADKRKWGRVVKD 322