Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score =  105 bits (263), Expect = 1e-27
 Identities = 100/329 (30%), Positives = 155/329 (47%), Gaps = 24/329 (7%)

Query: 6   KPSL--------TAAMLAATFSFSSLAADLEK-IHFIVPGGAGGGWDMTARATGDALMKA 56
           KPSL         AA+LAA    ++  A   K +  +V   AGG  D+ ARA     M  
Sbjct: 5   KPSLFFPRRTFCAAALLAAAACATAQTAYPNKPVRVVVAFTAGGTTDILARAVTQH-MSE 63

Query: 57  KLVGNASYQNLSGGGGGKAIAHLIETADRQQDTLMINST-PIVI-RSLSGVFPQS-FRDL 113
           KL       N  GGGG      ++  A     TL++NS  P+ + ++L    P     DL
Sbjct: 64  KLRQPFVIDNKPGGGGNIGTEFVVR-APADGYTLIVNSVGPMAVNQTLYKSLPYDPLADL 122

Query: 114 TPVAEIVSDYGAFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKG 173
            PV +I       VV  +    + E+ +A  KANP ++   G +  G+  HL +    K 
Sbjct: 123 VPVVQIADVPNVLVVNPEVPAKTLEEFIAYAKANPNKLNY-GSTGVGTSSHLSSYMLSKR 181

Query: 174 QGLDPKEVRYVAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDI 233
            G D   V Y     G +A+  LL+G  Q +   +  V+   K+G++R +A++SPKR   
Sbjct: 182 VGADTLHVPY----KGANALNDLLAGRMQFMFATIPSVISHIKAGKLRAIAVSSPKRSRS 237

Query: 234 APDIPTLADYGNPT-TFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDRNGWI 292
            PD+PT+A+ G P  +  +W G+FA  G  A  VA+ N+   ++  S E ++IR+     
Sbjct: 238 LPDVPTVAEKGFPDFSAGSWFGFFAPKGTPATVVAQLNKSVNEVLPSLEAQMIRE---GA 294

Query: 293 DSYKGDKE-FYAFLEEQEKQMGDLMRELG 320
           D   G  E F  F  ++ ++   ++RE G
Sbjct: 295 DPVGGTPEQFGRFTRQEYEKWKTIVRESG 323