Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 88/327 (26%), Positives = 144/327 (44%), Gaps = 14/327 (4%)

Query: 1   MLKFFKPSLTAAMLAATFSFSSLAADL--EKIHFIVPGGAGGGWDMTARATGDALMKAKL 58
           M+K F P L AA+  AT   S+  A    + I +IVP  AGGG D  AR+  +A M+  L
Sbjct: 1   MMKRFLPLLAAALALATTLASAQPAAYPSQPIKWIVPYAAGGGTDNLARSLAEA-MQPSL 59

Query: 59  VGNASYQNLSGGGGGKAIAHLIETADRQQDTLMINSTPIVIRSLSGV-FP-QSFRDLTPV 116
                  N  G      ++ +++        +   +  ++      V  P +   D T +
Sbjct: 60  GQPLIIDNRPGASTNIGVSVMMQAKPDGYTVMQAENAALLFNEHMFVKLPYKPATDFTYI 119

Query: 117 AEIVSDYGAFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGL 176
             I     A VV  D    +  + V   KANP+++  A     GS  H+      +  GL
Sbjct: 120 GTIGRFPVALVVHPDFPAKNVAEFVRYVKANPEKVSYAS-PGNGSPHHMAMELFKQKAGL 178

Query: 177 DPKEVRYVAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPD 236
               + +V Y     AM+ ++ G+  V+   L   L + KSG+VRVLAI  P+R +  P+
Sbjct: 179 S---IVHVPYKGAAPAMSDVMGGQVPVMMLDLASGLSIIKSGKVRVLAIALPQRANALPE 235

Query: 237 IPTLADYGNP-TTFVNWRGYFAAPGVSAEKVAEWN-EVFKKMFASEEWKVIRDRNGWIDS 294
           +PT  + G P      + G     G+  E VA  N E+ K M A +  K+  D     ++
Sbjct: 236 VPTFVEAGFPDVNAYAFHGLIGPAGMPPEAVARLNAELHKAMKAPKVVKLFADFG--FEA 293

Query: 295 YKG-DKEFYAFLEEQEKQMGDLMRELG 320
             G  ++FY     + ++ G++++  G
Sbjct: 294 LPGTPQDFYKLSRAESERWGNIIKTAG 320