Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 78/274 (28%), Positives = 117/274 (42%), Gaps = 25/274 (9%)

Query: 3   KFFKPSLTAAMLAATFSFSSLAADLEKIHFIVPGGAGGGWDMTARATGDALMKAKLVGNA 62
           + F  +L AA +    SF    A  + I  +VP   GG  D+TAR  G+ + K  L    
Sbjct: 4   RHFISTLAAASILPGISF----AQGKPIRLVVPFPPGGATDITARVLGEPVAKI-LQQPV 58

Query: 63  SYQNLSGGGGGKAIAHLIETADRQQDTLMINSTPIVIRSLSGVFPQSFRDL--------T 114
              N +G GG   +A L   A    D L      I   S  GV P  ++ L         
Sbjct: 59  VIDNRAGAGGSIGMAEL---ARATPDGLTFG---IATLSTHGVNPAVYQKLPYDPIKGFA 112

Query: 115 PVAEIVSDYGAFVVAGDS-KYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKG 173
            V EIV   G  V+        ++ ++V   KANP ++  A     G++ H+        
Sbjct: 113 AVTEIVKAPGVIVINPTKLPVANFAELVKYLKANPGKVSYAT-PGNGTIGHMWGELFKST 171

Query: 174 QGLDPKEVRYVAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDI 233
            G     + ++ Y   G A+  +L+GE  V    +   L   K+G+++ LA++   RLD+
Sbjct: 172 TGTS---MVHIPYRGAGPAINDVLAGEVPVYFDQVASSLPHVKAGKLKALAVSWNGRLDV 228

Query: 234 APDIPTLADYGNPT-TFVNWRGYFAAPGVSAEKV 266
            PD+PT  + G PT    +W G  A  G  AE V
Sbjct: 229 LPDVPTYGELGYPTNNDPSWFGMVAPAGTPAELV 262