Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 83.2 bits (204), Expect = 8e-21
 Identities = 78/316 (24%), Positives = 131/316 (41%), Gaps = 11/316 (3%)

Query: 8   SLTAAMLAATFSFSSLAADLEKIHFIVPGGAGGGWDMTARATGDALMKAKLVGN-ASYQN 66
           SL AA + A  + S  A   + +  IVP  AG   D  ARA   +       G+    +N
Sbjct: 17  SLAAASMGAAIAQSENAG--KPLRMIVPLAAGSTVDAVARALAPSF--GHTTGHPVVVEN 72

Query: 67  LSGGGGGKAIAHLIETADRQQDTLMINSTPIVIRSLSGVFP-QSFRDLTPVAEIVSDYGA 125
           L G GG      L++         MI+S  ++   +    P  S +D+TP+A + +    
Sbjct: 73  LVGAGGLPGTTQLVKAPKDGLTLGMISSNHVINPGIYKSMPYDSLKDITPIAVLATVPLV 132

Query: 126 FVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYVA 185
            V        + ++++   KA+P  +   G +  GS  HL         G+D K   +V 
Sbjct: 133 LVTNSKLPVKNVQELLVYAKAHPNSLNY-GSAGNGSTLHLAGELMVSETGIDMK---HVP 188

Query: 186 YDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADYGN 245
           Y   G  +T L+ G+ Q+    + ++    K+G VR LA+++  R  + PD+PT+A+ G 
Sbjct: 189 YRGTGPLITDLVGGQVQLGFVSVSQIAPHVKAGAVRALAVSTATRSAVLPDVPTMAEAGV 248

Query: 246 PT-TFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDRNGWIDSYKGDKEFYAF 304
           P   F  W        +    V  +    K    S E +      G +   KG     AF
Sbjct: 249 PKYVFDAWIALVGPANLPKSIVDGYAAAIKAAMGSAEAQAAIAGQGLMTLDKGPDAAPAF 308

Query: 305 LEEQEKQMGDLMRELG 320
            + +  +   L+++ G
Sbjct: 309 FQSELTKHQKLVKQSG 324