Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 89.7 bits (221), Expect = 9e-23
 Identities = 83/319 (26%), Positives = 134/319 (42%), Gaps = 13/319 (4%)

Query: 9   LTAAMLAATFSFSSLAADLEKIHFIVPGGAGGGWDMTARATGDALMKAKLVGNASY-QNL 67
           L AA  A T S S  A D + I  +VP   GG  D+  R     +  A LVG+    +N 
Sbjct: 10  LAAAAAATTASASLWAQDDKPITLVVPYSPGGTTDLLGRLLARGM--APLVGSTIIVENR 67

Query: 68  SGGGGGKAIAHLIETADRQQDTLMINSTPIVIRS--LSGVFPQSFRDLTPVAEIVSDYGA 125
            G G G   A++       +  L+  ST + I       +     +D  P+  I S    
Sbjct: 68  PGAGSGLGAAYVAHAPADGRTLLIATSTTLAINPWLYKRLGYDPLKDFAPIGMIGSVPLV 127

Query: 126 FVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYVA 185
            VV      TS  ++VA  KA P ++   G +  GS  HL         G D   + +V 
Sbjct: 128 AVVNASLPVTSIAELVALSKAQPGKLSY-GSAGNGSPQHLAVEMFKAATGAD---LTHVP 183

Query: 186 YDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADYGN 245
           Y     AMT LL G+ Q++ + +   L   + G++R L +TS KR    P++ T+ + G 
Sbjct: 184 YRGSALAMTDLLGGQIQLMFSDIPPALAHVRGGKLRALGVTSAKRQPAMPELATIGESGA 243

Query: 246 PTT----FVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDRNGWIDSYKGDKEF 301
             T     + W+   A  G   E VA++    +K+    E +      G      G ++ 
Sbjct: 244 VGTKDFQAIAWQSLVAPAGCPPELVAKYAAALEKVMKQPEIQSRLASEGVEPVTMGPQQL 303

Query: 302 YAFLEEQEKQMGDLMRELG 320
            A+++ +  + G +++  G
Sbjct: 304 AAYMKSETVRWGAVVKASG 322