Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 79/312 (25%), Positives = 137/312 (43%), Gaps = 12/312 (3%)

Query: 12  AMLAATFSFSSLAADLEK-IHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQNLSGG 70
           A  AA  +  + A   +K I FI+P  AG G D   RA   AL KA        +NL G 
Sbjct: 19  ACAAAVAACPAFAQGSDKPIRFILPISAGSGVDTIVRAAAPALGKA-FGQPVVIENLPGA 77

Query: 71  GGGKAIAHLIETADRQQDTLMINSTPIVIRSLSGVFP-QSFRDLTPVAEIVSDYGAFVVA 129
           GG    A +++ A       M+++  ++  ++    P  +  D+TP++ + +     V  
Sbjct: 78  GGITGAAAIVKAAPDGLTLGMVSNNHVINPAVFKKMPFDALNDITPISVVGATPLVLVAN 137

Query: 130 GDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYVAYDAG 189
                 + ++++A  +A P     A  S  G++ HL         G+   + R++ Y   
Sbjct: 138 PKLPAKNVQELIALLRAKPGGYNYAS-SGNGTILHLADEMFMDEAGV---KARHIPYKGT 193

Query: 190 GSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADYGNPTTF 249
           G  MT ++ G+ ++    L  V +  KSG +R + +    R   APDIPT+A+ G P   
Sbjct: 194 GPMMTDMIGGQVEMGVIALPAVQQHIKSGALRAIGLCGATRSPAAPDIPTIAEQGLPNYA 253

Query: 250 VNWRGYFAAPGVSAEKVAEWNEVFKKM---FASEEWKVIRDRNGWIDSYKGDKEFYAFLE 306
           V   G+FA  G +  + AE   V   +   F S E K   D+ G +      ++  A+  
Sbjct: 254 V--EGWFAVIGPAKMQAAEVQRVHDAVAAAFTSAEVKEAMDKQGNVIKPTTPEQAAAYFR 311

Query: 307 EQEKQMGDLMRE 318
            +  +   L+++
Sbjct: 312 SEAARYAALVKK 323