Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 78/274 (28%), Positives = 125/274 (45%), Gaps = 10/274 (3%)

Query: 11  AAMLAATFSFSSLAADLEKIHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQNLSGG 70
           AA+ AA+ +++      + +  IV   AGG  D+ ARA GD L  A++       N +G 
Sbjct: 21  AALCAASGAYAQAVP--KTVRLIVAYPAGGVSDVVARALGDRLA-AQMGITVIVDNRAGA 77

Query: 71  GGGKAIAHLIETADRQQDTLMINSTPIVIRSLSGVFP-QSFRDLTPVAEIVSDYGAFVVA 129
            G   +  + + A           +P+V+    G  P    +D+ PVA ++      +  
Sbjct: 78  SGAIGMDAVAKAAPDGATLGFSAISPLVLSPHLGKLPFDPLKDVAPVASVMYSPVLLIAT 137

Query: 130 GDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYVAYDAG 189
             SK   ++ ++ D KA+P  ++ A  S   S+ H+V        G+D   + +V Y  G
Sbjct: 138 PASKAKDFKALIDDAKAHPGAVRWAT-SGPASLGHIVLEQLHAAAGVD---ITHVPYKGG 193

Query: 190 GSAMTALLSGETQVLSTGLGEVLEMS-KSGQVRVLAITSPKRLDIAPDIPTLADYGNPTT 248
           G  +   + G+ +VLST     L    +SG++R LA+ +P RLD  P +PTL + G    
Sbjct: 194 GQQLNDAIGGQFEVLSTNASPTLSSHIQSGKLRPLAVGAPARLDSLPQVPTLGELGYKAA 253

Query: 249 FVN-WRGYFAAPGVSAEKVAEWNEVFKKMFASEE 281
            +N   G FA     A  VA +N    K  AS E
Sbjct: 254 NINSLFGVFAPAATPAALVARYNAEINKALASPE 287