Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 87/334 (26%), Positives = 139/334 (41%), Gaps = 20/334 (5%)

Query: 1   MLKFFKPSL-TAAMLAATF--SFSSLAADLE--KIHFIVPGGAGGGWDMTARATGDALMK 55
           M  F +P L +AA + AT   + + L   L    +  +V   AGG  D  AR   + L  
Sbjct: 1   MRTFVRPLLASAAFMLATLPTAHAELPTGLAGGNLKIVVGYAAGGAADTVARLYAEQLKD 60

Query: 56  AKLVGNASYQNLSGGGGGKAIAHLIETADRQQDTLMINSTPIV-IRSLSGVFP--QSFRD 112
           A   G+    N   G   +    +++ +     TL +  +P++ I  L+   P   + +D
Sbjct: 61  AGF-GSVLVDN-KPGASARLAWDMVKKSKADGLTLYLAPSPLLTILPLTYKTPGYDADKD 118

Query: 113 LTPVAEIVSDYGAFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFK 172
           LTPVA +V    A V      Y+S +Q V   K NPK+  + G +  GS  HL A A  K
Sbjct: 119 LTPVALLVEIPTAVVTGASQPYSSMKQYVEWAKKNPKKATL-GLATIGSSGHLGAFALAK 177

Query: 173 GQGLDPKEVRYVAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLD 232
            QG    EV  VAY      +  ++ GE  +       +L + K G+++ L ++  KRL 
Sbjct: 178 AQGF---EVTPVAYRGASPMLIDVVGGELSMGWDAAASMLPLYKGGKIKFLGLSGDKRLA 234

Query: 233 IAPDIPTLADYG----NPTTFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDR 288
             PD+PT  + G     P T  +W   +A  G     +A     F    A  E     + 
Sbjct: 235 ALPDVPTAKEQGFAEFVPAT--SWYAVYAPAGTPPATLAALERSFLAAAAKPELARSLEA 292

Query: 289 NGWIDSYKGDKEFYAFLEEQEKQMGDLMRELGFL 322
            G +   +G  E     + +      +++  G +
Sbjct: 293 AGLVAHAEGRAELAQRAQRERANWAPIVKAAGIV 326