Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) from Variovorax sp. SCN45

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 77/259 (29%), Positives = 111/259 (42%), Gaps = 7/259 (2%)

Query: 10  TAAMLAATFSFSSLAADLEK-IHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQNLS 68
           T A +AA       AA  +K I  +VP  AGGG D TAR     L  A L       N  
Sbjct: 10  TIAAIAACAPLLGWAAWPDKPIRMVVPYAAGGGADNTARIVAQQL-SAALGQQIVIDNRP 68

Query: 69  GGGGGKAIAHLIETADRQQDTLMINSTPIVIRSLSGVFPQSFRDLTPVAEIVSDYGAFVV 128
           G GG     ++ + A      L   S   V  SL  +   + +D  PV+ + +     VV
Sbjct: 69  GAGGVIGADNVAKAAADGYTVLYDASAFSVNPSLRKLPFDAAKDFIPVSLVATAPQILVV 128

Query: 129 AGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYVAYDA 188
             ++ Y +  + +   + NP ++  A  SA G     +A  A   Q      + +V Y  
Sbjct: 129 PENAPYKTVAEFLDFARKNPGKLSFA--SAGGGTGSHLAGEALNEQA--KVNLMHVPYKG 184

Query: 189 GGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADYGNP-T 247
           G  A+T L+ G+       +   L   KSG++R LA++S KR+   PD PTL + G P  
Sbjct: 185 GAPALTDLMGGQVSAYFGNVASTLSYVKSGKLRALAVSSTKRVPALPDTPTLGESGLPGY 244

Query: 248 TFVNWRGYFAAPGVSAEKV 266
             V W G F   G  A+ V
Sbjct: 245 NVVEWNGVFLPKGTPADIV 263