Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 11/296 (3%)

Query: 30  IHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQNLSGGGGGKAIAHLIETADRQQDT 89
           +  +VP  AGG  D+ AR   D L KA  +G A   +   G GG   +  +  A     T
Sbjct: 38  VTLVVPFPAGGSVDLIARLYADPLAKA--LGTAVVIDNRAGAGGSIASAQVARAKPDGYT 95

Query: 90  LMINS-TPIVIRSLSGVFP--QSFRDLTPVAEIVSDYGAFVVAGDSKYTSWEQVVADFKA 146
           L+ +S +  +   L+   P     +D   ++++       +V       ++++ VA  K+
Sbjct: 96  LVASSQSSHLANPLTQPNPGYDPIKDFASISQLARSINVLLVNPAVPAKNFKEFVALVKS 155

Query: 147 NPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYVAYDAGGSAMTALLSGETQVLST 206
            P ++        GSM  L          L+     +V Y  GG  +TAL+S E Q    
Sbjct: 156 RPGELNYCSAGP-GSMGQLNVELMKSQLQLN---ATHVPYRGGGPLVTALISNEVQFGLD 211

Query: 207 GLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADYGNPT-TFVNWRGYFAAPGVSAEK 265
            L   L   ++G++R LA+ SP R+   PDIPT A+ G P     +W G  A      E 
Sbjct: 212 NLAPFLPQIQAGKLRALAVASPTRVAALPDIPTFAELGYPVLNTTSWIGLAAPAKTPPEV 271

Query: 266 VAEWNEVFKKMFASEEW-KVIRDRNGWIDSYKGDKEFYAFLEEQEKQMGDLMRELG 320
           +A  ++  + +       + +  R       +   +F A + E+    GDL++  G
Sbjct: 272 IAALHKAVRSVADQPSMVEALESRGSLPPEAQSPAQFTAMMSERLAVYGDLVKRAG 327