Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) from Variovorax sp. SCN45

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 78/321 (24%), Positives = 137/321 (42%), Gaps = 17/321 (5%)

Query: 11  AAMLAATFSFSSLAA-----DLEKIHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQ 65
           A+++AA    S LAA       + +  ++   AGG  D+T R   D    +K++G     
Sbjct: 11  ASLVAACGLASPLAAFAQGFPTKPVKLVIAFPAGGPTDITMRQLADNA--SKILGQPVII 68

Query: 66  NLSGGGGGKAIAHLIETADRQQDTLMINSTPIVIRSL---SGVFPQSFRDLTPVAEIVSD 122
           +   G GG   A  ++TA  Q D   +   P+ +  L   + +     +D+T V  +   
Sbjct: 69  DNKPGAGGTLPAQALQTA--QPDGYTVAQIPLGVFRLGYTTKINWDPLKDITYVLNVTGY 126

Query: 123 YGAFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVR 182
               VV  DS + +W   VA  KANP ++   G +   +  HL      +  G+   E++
Sbjct: 127 AFGIVVPADSPFKTWADFVAYAKANPGKLTY-GSTGTLTSPHLTTEIVAQKAGI---ELQ 182

Query: 183 YVAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLAD 242
           +V Y      M A++SG+    +   G   ++ ++G++RVL     KRL   PD PTL +
Sbjct: 183 HVPYKGSADLMLAVVSGQLMAAADSTGFAPQV-EAGKLRVLNTWGDKRLAKFPDAPTLKE 241

Query: 243 YGNPTTFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDRNGWIDSYKGDKEFY 302
            G      +  G  A  G   E V + ++ FK+      +     R   + +Y     + 
Sbjct: 242 LGYDVVQNSPFGIGAPKGTPPEVVKKLHDAFKQAMEEPSYVAALGRYDMLPNYMSSATYT 301

Query: 303 AFLEEQEKQMGDLMRELGFLK 323
            F ++   +   ++ +LG  K
Sbjct: 302 KFAQDTVVREKVVIEKLGLAK 322