Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 78/275 (28%), Positives = 123/275 (44%), Gaps = 17/275 (6%)

Query: 11  AAMLAAT----FSFSSLAADLEKIHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQN 66
           AA LA T    F+  S     + I  +VP  AG G D  AR TG  L  A L G+    N
Sbjct: 26  AAGLAGTMPWAFAQDSGGYPKQPIRIVVPFAAGSGTDAVARITGQMLGDA-LKGSVIVDN 84

Query: 67  LSGGGGGKAIAHLIETADRQQDTLMI--NSTPIVIRSLSGVFPQS-FRDLTPVAEIVSDY 123
            +G  G  A A  +  A     TL +  N+T     SL    P    +D  PV+ + +  
Sbjct: 85  KAGANGVIA-AEAVAKAPPDGYTLFMTTNTTHSANPSLMKSLPYDPVKDFAPVSRMGNLP 143

Query: 124 GAFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRY 183
              VV  +    +  +++A  +A+P ++  A G++ G    +V  A        P  + +
Sbjct: 144 FMLVVNNELPVKNVAELLAWGRAHPGKLTYASGNSTG----IVCGATLSRMSGVP--MLH 197

Query: 184 VAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADY 243
           V Y +   A+  L+ G+  ++   L   L   K+G++R +A+T+ +R  + P++P LAD 
Sbjct: 198 VPYKSTPPAIADLIGGQVSMMVVDLAAGLATVKAGKMRAIAVTTQERTKLFPELPPLADT 257

Query: 244 GNPTTF--VNWRGYFAAPGVSAEKVAEWNEVFKKM 276
                F   +W G FA  G   E V + N+V   M
Sbjct: 258 PELKGFDITSWNGVFAPAGTPREIVRKLNKVLADM 292