Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score =  109 bits (272), Expect = 1e-28
 Identities = 85/283 (30%), Positives = 134/283 (47%), Gaps = 16/283 (5%)

Query: 10  TAAMLAATFSFSSLAADLEKIHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQNLSG 69
           TA  LA    F S     + + F+ P   GGG D TAR     L   + +G A+  +  G
Sbjct: 29  TAEPLAPRNGFPS-----QTVRFVSPFPPGGGNDATARLVTARL--PEFMGQAAVVDNRG 81

Query: 70  GGGGKAIAHLIETADRQQDTLMINSTPIVIRSLSGVFPQSF---RDLTPVAEIVSDYGAF 126
           G GG   A  +  A     TL+ +   I+  + S      F   ++  P+ +I +   A 
Sbjct: 82  GAGGNIGAKAVADAKPDGYTLLTSQVSIMAVNPSLYASPGFDPVKNFIPITQINAAPLAL 141

Query: 127 VVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYVAY 186
           VV  +S   S+  + A  KA+P ++  A     G++ HLV     K  G+    + +V Y
Sbjct: 142 VVDANSPLKSFADLAAKAKASPGKVTYAT-PGNGTLSHLVGVVLSKDNGI---AMTHVPY 197

Query: 187 DAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADYGNP 246
              G A+T LL G+  +L T    V  + ++G++RVLA+TSP+R+ +    PTL + G  
Sbjct: 198 KGAGPALTDLLGGQVDILVTSTSSVAGLVQNGKLRVLAVTSPRRIGVFTKAPTLEELGYA 257

Query: 247 -TTFVNWRGYFAAPGVSAEKVAEWNE-VFKKMFASEEWKVIRD 287
              F +W G+FA  G   E+VA  NE + + +   E  K++ D
Sbjct: 258 GARFEDWYGFFAPAGTPPERVAYLNEAIVRTLHMPEVAKLVTD 300