Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 26/299 (8%)

Query: 1   MLKFFKPSLTAAMLAATFSFSSL-AADLEKIHFIVPGGAGGGWDMTARATGDALMKAKLV 59
           M+K    S++ A+ AAT    S+ A D      +V    GGG D  AR   D L +  L 
Sbjct: 1   MMKRRHFSMSLALAAATSPVPSVWAQDTTPTRILVGFPPGGGVDAVARLLADKL-RVSLN 59

Query: 60  GNASYQNLSGGGGGKAIAHLIETADRQQDTLMINSTPIVIRSLSGVFPQSF-----RDLT 114
            N    N  G  G  A++ L  +    +   +     + I  L  ++P S      +D T
Sbjct: 60  TNVLVDNRPGAAGRIALSELKRSRPDGRTLAIAPGGALTI--LPWLYPASLGYDPVKDFT 117

Query: 115 PVAEIVS-----DYGAFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAA 169
           PV+ + +       G  V  GD K      + A  KANP +   A   A GS+ H     
Sbjct: 118 PVSRLTTLDLAMSVGPAVPPGDVK-----AMFAWMKANPAKASYATSGA-GSVPHFAGLV 171

Query: 170 AFKGQGLDPKEVRYVAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPK 229
             +  G+    + +V Y  G  A+  L+ G+  ++     EV+EM ++G++RVLA+T  +
Sbjct: 172 IAQATGVP---LLHVPYRGGAPAIQDLIGGQVPLMIDSPAEVVEMHRNGKLRVLAVTGAQ 228

Query: 230 RLDIAPDIPTLADYGNPTTFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDR 288
           R    PD+PTL + G      N+ G +    + A      ++   +  AS++   +RD+
Sbjct: 229 RTPALPDVPTLRESGIDVVVDNFFGLYGPANMPAAATERIDKAVAQALASQD---VRDK 284