Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 82.8 bits (203), Expect = 1e-20
 Identities = 79/321 (24%), Positives = 141/321 (43%), Gaps = 9/321 (2%)

Query: 1   MLKFFKPSLTAAMLAATFSFSSLAADLEK-IHFIVPGGAGGGWDMTARATGDALMKAKLV 59
           M K  +  L A + AA F+  + AA  E+ I  +VP   GG  D  AR    A+     +
Sbjct: 1   MKKIIRSVLAACLCAAAFAHVAHAAYPERPITLVVPYAPGGSADALARVL--AVRVGVKL 58

Query: 60  GNASYQNLSGGGGGKAIAHLIETADRQQDTLMINSTPIVIRS-LSGVFPQSFRDLTPVAE 118
           G +   +   G  G   A     A     T++ ++TP  I   L    P +   L P+A 
Sbjct: 59  GTSVIVDNRPGASGTIGASFAAKATPDGYTVLYDATPYSINPHLFPRMPFASNALQPLAL 118

Query: 119 IVSDYGAFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDP 178
           +       +V  +S   S +++V   +A P ++  A G   G++  L A    +  GLD 
Sbjct: 119 VALAPNIVIVRAESPVKSIKELVDKARAEPGKMNFASGGG-GTVQRLAAELLRQRLGLD- 176

Query: 179 KEVRYVAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIP 238
             + +V Y +GG A+  ++ G+   + + +     +  SG++R LA++SP+R    P++P
Sbjct: 177 --MVHVGYKSGGPAIVDVMGGQVDFMFSTIAASYPLVSSGKLRALAVSSPQRSSRLPEVP 234

Query: 239 TLADYGNP-TTFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDRNGWIDSYKG 297
           TLA+   P      W G     G  A    + ++   ++   ++ K      G       
Sbjct: 235 TLAETVVPGYEAYEWNGLLLPAGTPAPIADKLHKAVIEVLKEDDVKRRFVDVGVQPVGST 294

Query: 298 DKEFYAFLEEQEKQMGDLMRE 318
             EF  FL++++ +  D++R+
Sbjct: 295 PDEFAEFLKKEDAKWADVIRK 315