Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., putative exported protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 71/250 (28%), Positives = 106/250 (42%), Gaps = 14/250 (5%)

Query: 38  AGGGWDMTARATGDALMKAKLVGNASYQNLSGGGGGKAIAHLIETADRQQDTLMINSTPI 97
           AGGG DM AR  G  L  A + G     +   G  G+    ++  A    D  M+ ++P 
Sbjct: 42  AGGGVDMIARLVGQKL--AAVTGQPFVVDNRAGASGRIGLPVVAKAP--PDGYMLMASPA 97

Query: 98  -VIRSLSGVFPQ----SFRDLTPVAEIVSDYGAFVVAGDSKYTSWEQVVADFKANPKQIK 152
             + +   +F +    +  D  P+ ++ +     VV    KY +   VVA  K  P+ + 
Sbjct: 98  SFLTTNKHIFKEMPYDAETDFAPITKLANQAMVLVVRDQRKYATVGAVVAAAKDKPESVN 157

Query: 153 IAGGSARGSMDHLVAAAAFKGQGLDPKEVRYVAYDAGGSAMTALLSGETQVLSTGLGEVL 212
            A  S  GS  HL A     G  +    + +V Y  G  A+  LL G   +L   L E L
Sbjct: 158 YAS-SGDGSPQHLAALMFETGTKV---RMTHVPYKGGALAINDLLGGNVDILFAPLPEAL 213

Query: 213 EMSKSGQVRVLAITSPKRLDIAPDIPTLADYGNPT-TFVNWRGYFAAPGVSAEKVAEWNE 271
              K+G++  L I S +R  + PD+PT+ + G P   F  W G  A        V + N 
Sbjct: 214 PHVKAGKLVALGIMSEQRSPLIPDVPTMREAGIPNMEFQTWIGMLAPARTPRPIVEQLNR 273

Query: 272 VFKKMFASEE 281
               + ASEE
Sbjct: 274 QIHAILASEE 283