Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 93.6 bits (231), Expect = 6e-24
 Identities = 89/316 (28%), Positives = 135/316 (42%), Gaps = 8/316 (2%)

Query: 11  AAMLAATFSFSSLAADLEK-IHFIVPGGAGGGWDMTARATGDALMKAKLVGNASY--QNL 67
           +A +A     ++LAA  EK I  IV   AGGG D   R+    + K +L G+A     N 
Sbjct: 42  SAAVALAAPGAALAAYPEKPISLIVGYAAGGGSDFIVRSLAPFIEK-ELGGSARVIVMNR 100

Query: 68  SGGGGGKAIAHLIETADRQQDTLMINSTPIVIRSLSGVFPQSFRDLTPVAEIVSDYGAFV 127
            G GG    A + +         +INS  +V   +      S   L P+  +V D G+FV
Sbjct: 101 PGAGGEIGFAAIADATPDGYTIGLINSPNVVTIPIERHARFSLDRLDPLYNLVDDPGSFV 160

Query: 128 VAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYVAYD 187
           V  DS + +   V A  KANP  + + G +  GS DHL   A    Q L   ++ +V + 
Sbjct: 161 VHKDSPFQTLADVAAFAKANPNNVTV-GTTGIGSDDHL---AMLMFQRLTQTQLTHVPFP 216

Query: 188 AGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADYGNPT 247
               A  ALL    QV S  +GE     +   +R+L + + KR + A D+PT  + G   
Sbjct: 217 GSADAHRALLGRHIQVTSMNIGESARAREGDPIRILGVMTEKRSEQAADVPTFTELGFDV 276

Query: 248 TFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDRNGWIDSYKGDKEFYAFLEE 307
              + RG  A  G+  E      +   K     E++ I  +           ++ A L+ 
Sbjct: 277 KMSSLRGLAAPMGLPPEVRTRLVDAIAKAVQHPEFQDIARKAYQPLRLLPSDQYAAELKT 336

Query: 308 QEKQMGDLMRELGFLK 323
           QE     + +E  +LK
Sbjct: 337 QEATFRTIWKETPWLK 352