Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  297 bits (760), Expect = 7e-85
 Identities = 169/505 (33%), Positives = 274/505 (54%), Gaps = 12/505 (2%)

Query: 2   LDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPASGLIL 61
           ++ +L GL   +    ++ +++    G  +G +PGL    AIAL++PIT+ ++P   +  
Sbjct: 1   MNAVLAGLDLVLRWDVILTILVASAFGLVVGAMPGLTATMAIALLVPITFFMDPIPAVGA 60

Query: 62  MAGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGTL 121
           M      AIF G   + L+  PG  ++   + + Y M +KG+A  AL      S  GG  
Sbjct: 61  MISCSAMAIFAGDIPATLMRMPGTPASAAYSDECYAMTRKGEAEVALGANVLFSALGGLF 120

Query: 122 SAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLSTV 181
              +L+ +AP LA+++L F S +YF L L+GL A A F G G  +K  +   LGL ++ +
Sbjct: 121 GTAVLIVSAPLLAEIALGFSSFEYFWLALMGL-ACAIFIGSGSPVKGLVSLFLGLFVAQI 179

Query: 182 GIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQE---QMK 238
           GID   GV RFTFG ++L+ G  F+   +  FA+ E +  I     D S  +      +K
Sbjct: 180 GIDNPAGVPRFTFGNSNLLGGVDFIPAMIGLFAMSEVIRTIAAGAPDWSVRQTSLGNPLK 239

Query: 239 NIGSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEF 298
             G +      + +  P  +R +I G   G+LPGAGA IAA+++Y M R  +   +K  F
Sbjct: 240 GWGRL------IVKYWPQQIRGNITGTAIGILPGAGADIAAWVSYAMSRKFSKTPEK--F 291

Query: 299 GQGSLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHP 358
           G G + G++   SANNAA +G++VP L  GIPG   TAI++G L   G+ PGP LF+++P
Sbjct: 292 GTGHVEGIIESTSANNAALAGAWVPALVFGIPGDSITAIVIGVLYLKGLNPGPTLFLNNP 351

Query: 359 DIFWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMD 418
           +  ++V I   + N+ ++ L L  +   + LL  PR +L+P+IL F I G Y V+ +   
Sbjct: 352 ESIYAVFIIFIIANLAMIPLGLAALKAGTALLRFPRRILIPLILLFCIVGAYAVNNSAYG 411

Query: 419 VYVMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLA 478
           V +M++  +    +   + P+AP +LG +LG ++EE+   ++I  DG +   +ERPI   
Sbjct: 412 VVLMLVFGILGFLMEEHDIPIAPCVLGIVLGKMLEESFVTSMIKADGNLLAFFERPIAGG 471

Query: 479 FTVLAIVTLLSPLFGRLMERKKRPT 503
             V+ ++    PL+G L  R+   T
Sbjct: 472 LGVMTLLVFCLPLWGALKRRRTAAT 496