Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  351 bits (901), Expect = e-101
 Identities = 188/510 (36%), Positives = 305/510 (59%), Gaps = 14/510 (2%)

Query: 2   LDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPASGLIL 61
           L  ++ G      P N++ + +G  +G  IG+LPGLG  + +A+++P+T+ + P S +I+
Sbjct: 4   LTSLIGGFGVLADPMNIIYMFVGIALGVLIGVLPGLGGANGVAILLPLTFSMTPVSAIIM 63

Query: 62  MAGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGTL 121
           ++ +Y+GA+FGG+ +SIL N PG   +V T FDG+PMAQKG+AG+AL  A   SF G   
Sbjct: 64  LSSIYWGALFGGAITSILFNIPGEPWSVATTFDGHPMAQKGKAGEALTGAFTGSFIGAFF 123

Query: 122 SAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMT--VLGLMLS 179
           + +++ F AP +AK +L F  +++FA+ L+      AF G G+   A +++  +LG  L+
Sbjct: 124 AVLLITFLAPVIAKFALQFGPAEFFAVYLL---TFCAFVGMGREPAAKVISAMMLGFALA 180

Query: 180 TVGIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKN 239
            VGID   G  R TFG  +L+ GF FL+  +  F +GE L+ + +  A    +     K 
Sbjct: 181 AVGIDTVTGQLRMTFGSVELLRGFDFLVAVIGLFGVGEILLTMEEGLAFKGKSAAINAKV 240

Query: 240 IGSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFG 299
           +     T +++ +     LRS+I+G + GV PG GAT A+F++YG+ +  +       FG
Sbjct: 241 VWE---TWKKLPKYWVGCLRSAIVGCWMGVTPG-GATPASFMSYGLAKKFSKNGNN--FG 294

Query: 300 QGSLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPD 359
           +G L G+V PE A +AA + + +P+LTLGIPGS T A++LG L+ +G+QPGP LFV+  D
Sbjct: 295 KGELEGVVMPEVAAHAAGTSALLPMLTLGIPGSPTAAVLLGGLLIWGLQPGPLLFVEQKD 354

Query: 360 IFWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMDV 419
             W +I S+Y+GNI  LI+ L  +P  + +L +P +V+ P+IL     G Y V    +D+
Sbjct: 355 FVWGLIASIYLGNIAGLIVVLTTVPIFAAILRIPFSVIAPVILVICAVGAYTVHNAGLDI 414

Query: 420 YVMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAF 479
            VM++  +     +   +PLAPL+L  +LG + E + R+A++++ G +S  W  P+  + 
Sbjct: 415 AVMLVFGVIGYLFKKLQYPLAPLVLALVLGDMAESSFRQAMLVSQGHLSIFWSNPLVGSI 474

Query: 480 TVLAIVTLLSPLFGRLMER---KKRPTGAK 506
             LA+V L+ PL  ++M R    K P  A+
Sbjct: 475 VTLALVMLVWPLVSKVMARLNGHKEPAAAE 504