Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  421 bits (1081), Expect = e-122
 Identities = 222/488 (45%), Positives = 314/488 (64%), Gaps = 8/488 (1%)

Query: 1   MLDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPASGLI 60
           +LD +  G + A+   N+    +G  +GT IG+LPGLGP++ IA+++P+T+GL P S LI
Sbjct: 3   LLDNLALGFSVALSLQNIFYCFVGALLGTLIGVLPGLGPVATIAMLLPLTFGLPPVSALI 62

Query: 61  LMAGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGT 120
           ++AG+YYGA +GGST++ILIN PG SS+VVTA DG+ MA+KG+AG ALA AA  SF  G+
Sbjct: 63  MLAGIYYGAQYGGSTTAILINLPGESSSVVTAIDGHQMARKGRAGAALATAALGSFFAGS 122

Query: 121 LSAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLST 180
           ++ ++L   AP LA ++L F   +YF+LM++GL A    A  G V+KA  M VLGL+L  
Sbjct: 123 VATLLLALFAPPLANLALQFGPPEYFSLMVLGLIASVTLAS-GSVVKAIAMIVLGLILGL 181

Query: 181 VGIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKNI 240
            G D   G  RFTF L +L DGF F+ LAM  F + E +  +     ++          +
Sbjct: 182 SGQDIYTGTPRFTFDLPELSDGFDFVALAMGMFGISEIIRNL-----EDEHQRSLVAAKV 236

Query: 241 GSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFGQ 300
            S+ LTKEE K      LR + LG F G+LPG GA +++F +Y +E+ L+     +EFG+
Sbjct: 237 KSLMLTKEEFKRIIAPVLRGTALGSFLGILPGGGAMLSSFASYSIEKKLS--RHPQEFGR 294

Query: 301 GSLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPDI 360
           G++ G+  PESANNA +  SF+P+LTLGIP +   A+M+GALI  GI PGP +  + PD+
Sbjct: 295 GAIEGVAGPESANNAGAQTSFIPMLTLGIPSNPVMALMIGALIIQGITPGPNVVTEKPDL 354

Query: 361 FWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMDVY 420
           FW VI SM+VGN +L++LNLPLI    KLL VP  V+ P I+ F   GVY V+ N  DVY
Sbjct: 355 FWGVIASMWVGNFMLVLLNLPLIGMWVKLLTVPYHVMFPAIIAFCCIGVYSVNNNVFDVY 414

Query: 421 VMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAFT 480
            M L  +   AL   +   APLLLGF++G ++EE LRRA++I+ G+ +    RPI+    
Sbjct: 415 TMALFGLLGYALVKLDCEPAPLLLGFVIGPMLEEYLRRAMLISRGDPTVFVTRPISAVLL 474

Query: 481 VLAIVTLL 488
           +LA+  L+
Sbjct: 475 LLALAALV 482