Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 503 a.a., Tripartite tricarboxylate transporter TctA family from Variovorax sp. SCN45

 Score =  416 bits (1070), Expect = e-121
 Identities = 218/494 (44%), Positives = 318/494 (64%), Gaps = 10/494 (2%)

Query: 1   MLDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPASGLI 60
           +++ +  G   A   TNL+  ++GC +GT IG+LPG+GP++ IA+++P TY L P S LI
Sbjct: 3   LVEHLSMGFGVAFTFTNLLYCLVGCILGTLIGVLPGIGPVATIAMLLPATYALPPVSALI 62

Query: 61  LMAGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGT 120
           ++AG+YYGA +GGST++IL+N PG SS+VVT  DGY MA+KG+AG ALA A   SF  G 
Sbjct: 63  MLAGIYYGAQYGGSTTAILVNLPGESSSVVTVIDGYQMARKGRAGPALAAAGLGSFFAGC 122

Query: 121 LSAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLST 180
           +  ++L   AP L +++  F  ++YF+LM++GL      A  G ++KA  M VLGL+L  
Sbjct: 123 VGTLILAAFAPPLTELAFKFGPAEYFSLMILGLIGAVVLAS-GSLLKAIAMIVLGLLLGL 181

Query: 181 VGIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKNI 240
           VG D   GV R++F + +L DG  F+ +AM  F  GE +  + +PD +      +    +
Sbjct: 182 VGTDVNSGVARYSFDIPELTDGIGFVAIAMGVFGYGEIIANLSRPDDEREVFTAK----V 237

Query: 241 GSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFGQ 300
             +  TKE+ K   P  LR + LG   G+LPG GA +AAF AY +E+    K  +  FG+
Sbjct: 238 SGLFPTKEDFKRMTPAVLRGTALGSALGILPGGGALLAAFAAYTIEKKTKLKPGEVPFGK 297

Query: 301 GSLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPDI 360
           G++RG+ APESANNA +  SF+PLLTLGIP +   A+M+GA+  + IQPGP++   +P++
Sbjct: 298 GNIRGVAAPESANNAGAQTSFIPLLTLGIPPNAVMALMVGAMTIHNIQPGPQVMTSNPEL 357

Query: 361 FWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMDVY 420
           FW +I SM++GN +L+ILNLPLI    KLL+VP   L P I+ F   GVY  + NT DV+
Sbjct: 358 FWGLIASMWIGNAMLIILNLPLIGMWIKLLSVPYKYLFPAIVLFCAIGVYSTNNNTFDVW 417

Query: 421 VM-ILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPIT--- 476
           ++ I   +G +  +L   P APLLLGFILG +MEENLRR+L+++ G+ S    RP++   
Sbjct: 418 MVGIFGLVGYMFFKLGCEP-APLLLGFILGPMMEENLRRSLLLSRGDWSVFVTRPLSAGL 476

Query: 477 LAFTVLAIVTLLSP 490
           LA   L ++ +L P
Sbjct: 477 LAAAALLLIIVLLP 490