Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., putative Tricarboxylate transport protein TctA from Pseudomonas putida KT2440

 Score =  424 bits (1089), Expect = e-123
 Identities = 222/487 (45%), Positives = 319/487 (65%), Gaps = 10/487 (2%)

Query: 7   QGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITY--GLEPASGLILMAG 64
           QG   A+ P NL+  + G  +GT +G+LPGLGPI+ +AL+IPI +  GL P S LIL+A 
Sbjct: 9   QGFGIALSPYNLVTALSGTLIGTVVGLLPGLGPINGVALLIPIAFALGLPPESALILLAA 68

Query: 65  VYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGTLSAI 124
           VY G  +GG  SSIL+N PG +STV+T  DGYPMA++G AG AL+L+A++SF G  ++  
Sbjct: 69  VYLGCEYGGRISSILLNIPGEASTVMTTLDGYPMARQGLAGVALSLSAWSSFIGAFIATC 128

Query: 125 MLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLSTVGID 184
            ++  AP LAK +++F  ++YF LM+  + A+   AG  + +K ++  ++GL LS VGID
Sbjct: 129 GMVLFAPLLAKWAIAFGPAEYFVLMVFAIVALGGMAGD-KPLKTFIAALIGLFLSAVGID 187

Query: 185 KGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKNIGSMK 244
              GV RFT     L DG  F++L +  F++ E L+ + K    + A     +K  G M 
Sbjct: 188 ANSGVYRFTGDSVHLADGIQFVVLVLGLFSISEILLLLEKTHHGHQA-----VKATGRML 242

Query: 245 LTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFGQGSLR 304
              +E      V++R  +LGF  GVLPGAGAT+A+ +AY  E+ +A ++ K  FG+G  R
Sbjct: 243 FNFKEAASVFLVNIRCGLLGFIMGVLPGAGATLASAVAYMTEKRMAGESGK--FGKGDAR 300

Query: 305 GLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPDIFWSV 364
           GL APE+A  A+  G+ VP+LTLG+PGSGTTA+M+GAL  Y I PGP LF   PDI W +
Sbjct: 301 GLAAPETAIGASCCGALVPMLTLGVPGSGTTAVMIGALTLYNITPGPLLFEQQPDIVWGL 360

Query: 365 IISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMDVYVMIL 424
           I S++V NI+L+ILN+P+I   +++LAVP   L+P+I   +  GVY V   T D+++M+ 
Sbjct: 361 IASLFVANIMLVILNIPMIRIFTRILAVPNWALVPVIAIITAIGVYAVHATTFDLFLMVG 420

Query: 425 VAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAFTVLAI 484
           + +    +R  +FPL+P+LLGFILGGLME+NLRRAL I++GE+  LW  PI++    L +
Sbjct: 421 IGIMGYIMRKLDFPLSPILLGFILGGLMEQNLRRALSISNGELGILWSSPISMGIWALVV 480

Query: 485 VTLLSPL 491
           V L  PL
Sbjct: 481 VMLALPL 487



 Score = 25.4 bits (54), Expect = 0.005
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 338 MLGALIAYGIQPGPRLFVDHPDIFWSVIISMYVGNIVLLILNLPLI 383
           +LG L+   ++    +      I WS  ISM +  +V+++L LPL+
Sbjct: 443 ILGGLMEQNLRRALSISNGELGILWSSPISMGIWALVVVMLALPLL 488