Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., Tricarboxylate transport membrane protein TctA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  313 bits (801), Expect = 1e-89
 Identities = 191/505 (37%), Positives = 293/505 (58%), Gaps = 22/505 (4%)

Query: 3   DGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPASGLILM 62
           D + QGLA       L ++ +G  VG+  G LPGLGP++AIAL++P T GL     L+++
Sbjct: 7   DALAQGLAAVWGWQALGLIALGVLVGSVFGALPGLGPVAAIALLLPATLGLPSLPALLVL 66

Query: 63  AGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGTLS 122
           AGVYYGA +GGS  +I+++ PG +S+V+T+ DG+PMA +G+AG AL++A  +SF  G L+
Sbjct: 67  AGVYYGAQYGGSLPAIVLDQPGEASSVMTSHDGHPMALQGRAGVALSMATLSSFAAGCLA 126

Query: 123 AIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLSTVG 182
             +++  APA+  + L F S + F L++VGL      A  G  +KA  MTVLGL+L   G
Sbjct: 127 VAVVVLLAPAVVSLGLQFGSPERFLLLVVGLVGATVLA-SGSFLKALAMTVLGLLLGLTG 185

Query: 183 IDKGIGVERFTFGLTD--------LMDGFSFLLLAMATFALGETL-----MGILKPDAD- 228
            D   G  RF     +        L DG  F+ LA+  F +         +  L P A  
Sbjct: 186 WDGHTGSARFVPEALEPWMGRHHGLTDGVGFIALALGFFVVAPVAAELAGLSALAPGAPA 245

Query: 229 NSANEQEQMKNIGSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERN 288
             A     + +  + + T++E+K+A P  LR + LG   GV+PG GA +++  AY +E  
Sbjct: 246 REAAPGTPVVSGMATRPTRQELKDALPALLRGTGLGAVLGVVPGGGALLSSLAAYRLEA- 304

Query: 289 LAPKAKKEEFGQGSLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQ 348
           +  + +    GQG+LRG+ APE+ANNA +  +++P+L LG+P +   A++LGAL  + IQ
Sbjct: 305 VVSRHRTPPLGQGNLRGVAAPEAANNAGAQTAYLPMLALGLPPNTVMALLLGALGLHAIQ 364

Query: 349 PGPRLFVDHPDIFWSVIISMYVGNIVLLILNLPL----IPYISKLLAVPRTVLLPMILFF 404
           PGP +    P +FW +++SM+VGN+ LL+LNLPL     P +  +L +PR  LL  +L  
Sbjct: 365 PGPSVMGTQPTLFWGLLVSMWVGNLFLLLLNLPLARWWAPALLAVLRLPRRALLTALLVA 424

Query: 405 SITGVYLVSFNTMDVY-VMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIIT 463
           +  G   +  +   V+ VM L  +G +  RL    +A LLLGF+L   +EE+LRRAL ++
Sbjct: 425 AGLGALALGPHGWGVWLVMALGLLGFVLQRLGCEGVA-LLLGFVLAPGLEEHLRRALQLS 483

Query: 464 DGEISFLWERPITLAFTVLAIVTLL 488
            G      ERP++    + A++ LL
Sbjct: 484 RGNWFVFIERPVSALLLMAAVLLLL 508