Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., Tricarboxylate transport membrane protein TctA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  298 bits (762), Expect = 4e-85
 Identities = 167/508 (32%), Positives = 276/508 (54%), Gaps = 19/508 (3%)

Query: 1   MLDGIL---QGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPAS 57
           M DG++   Q +A    P  +   ++   VG  +G LPGL    A+ALM  +T  L P+ 
Sbjct: 1   MFDGLIMFGQSIARFSGPETIAYALLASLVGVVMGALPGLTATMALALMTTLTLKLPPSQ 60

Query: 58  GLILMAGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFT 117
            L+++   Y G+I+GGS S+IL+N PG  ++  +  DGY +A++G AG+A+ +A   S  
Sbjct: 61  ALLILICTYVGSIYGGSRSAILLNIPGTPASAASCLDGYALARQGLAGRAMGIATTGSVM 120

Query: 118 GGTLSAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLM 177
           G  +    L    P L  ++L F + ++F L L G+       G    +K W+  + GL 
Sbjct: 121 GTLIGMFFLATLTPVLGGLALKFGAYEFFWLALFGVIIAGTLTGDDP-LKGWIAGIAGLF 179

Query: 178 LSTVGIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQM 237
           ++T+G +   G ERF +G+ DL  G   +   +  F   E L  +         N Q  +
Sbjct: 180 IATIGQEPQYGYERFAWGVRDLAGGIQLVPALVGAFGFAELLTAM--------RNRQAPV 231

Query: 238 KNIGSMKLTKEEVKEAAP---VSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAK 294
           K I +      +V++        LRS ++G   G++PG G  +AA+ +Y   +  + +  
Sbjct: 232 K-ISAFDTVIPKVRDVLQYWRTILRSGLIGTGVGIVPGVGEDVAAWSSYAAAKRASKE-- 288

Query: 295 KEEFGQGSLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLF 354
           KE+FG+GS+ GL+A E+ +NA   G+ +P+LTL IPGS   A+++ A+I +G++PGP + 
Sbjct: 289 KEKFGKGSIEGLMAAETGDNACVPGAVIPVLTLAIPGSAPAAVLMAAMIIHGVKPGPLIM 348

Query: 355 VDHPDIFWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSF 414
           V++P+  + V+  M    I +LI  L L   + ++L VP+ ++ P++      G + ++ 
Sbjct: 349 VENPEFVYDVVTMMLFATIGILIFGLVLTKALVQVLRVPQHLITPIVFVLCTVGSFAIAG 408

Query: 415 NTMDVYVMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERP 474
              DVYVM+   +    LR   +P+APL+LG +LG LME+NLRRALI++DG++S  + RP
Sbjct: 409 RLFDVYVMLAFGLIGFFLRHHGYPMAPLVLGIVLGDLMEKNLRRALILSDGDLSPFFTRP 468

Query: 475 ITLAFTVLAIVTLLSPLFGRLMERKKRP 502
           I      L   T+   L+  L  R+ RP
Sbjct: 469 IAGTVAALIFATIAWKLW-TLYGRRARP 495