Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., Tricarboxylate transport membrane protein TctA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  419 bits (1076), Expect = e-121
 Identities = 215/488 (44%), Positives = 318/488 (65%), Gaps = 10/488 (2%)

Query: 5   ILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLE--PASGLILM 62
           +L G   A  P NL++  IG F+GT +G+LPGLGPI+ +A+++P+ + ++  P + LIL+
Sbjct: 7   LLDGFGVAFSPVNLLIAAIGSFIGTVVGLLPGLGPINGVAILMPLAFAMKLPPEASLILL 66

Query: 63  AGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGTLS 122
           A VY G  +GG  SSIL+N PG +  ++TA DGYPMA+KGQAG AL+++A++SF G  ++
Sbjct: 67  AAVYIGCEYGGRISSILLNVPGDAGAIMTALDGYPMARKGQAGVALSISAWSSFVGSLVA 126

Query: 123 AIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLSTVG 182
            + ++  AP LA+ +LSF  ++YFALM    + +A   G   V KA +  ++GL +S VG
Sbjct: 127 TVGIVLFAPLLAEWALSFGPAEYFALMCFAFACIAGLMGDAPV-KAGLAALIGLSMSCVG 185

Query: 183 IDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKNIGS 242
           +D   GV RFT G   L DG  F+++ +  F++ E L+  +  +  +SA    Q    G 
Sbjct: 186 LDSNSGVYRFTGGDVHLSDGIQFVVVVIGVFSISEILL--MLQEHHSSAGLVTQT---GR 240

Query: 243 MKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFGQGS 302
           M     E+      +LR+S++GF  GVLPGAGAT+A+ + Y ME+ L  K  +  FG G 
Sbjct: 241 MMFNLREMAHTWWSTLRASVVGFGVGVLPGAGATVASAMTYAMEKRLIDK--EGTFGTGD 298

Query: 303 LRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPDIFW 362
           +RG+  PE+ANN+A++GSFVP+LTLG+PGSGTTA+M+GAL  Y I PGP LF   PD+ W
Sbjct: 299 IRGVAVPEAANNSAATGSFVPMLTLGVPGSGTTAVMMGALALYNITPGPALFSQQPDLVW 358

Query: 363 SVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMDVYVM 422
            +I SM++ NI+LL+LN+P++   +++L VP   L+P IL  S  GVY V   T D+ +M
Sbjct: 359 GLIASMFLANIILLVLNIPMVGLFTEILNVPNWALVPGILAVSSVGVYAVHATTFDLLLM 418

Query: 423 ILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAFTVL 482
           + + + A  LR    P+APL+LGF+LG LME+NLRRAL I++G++  L   PI +     
Sbjct: 419 VALGVAAYLLRKQGVPMAPLILGFVLGPLMEQNLRRALSISNGDVHILVGSPIAIGLWTT 478

Query: 483 AIVTLLSP 490
           A +TL+ P
Sbjct: 479 AALTLIVP 486