Pairwise Alignments

Query, 509 a.a., tripartite tricarboxylate transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  409 bits (1052), Expect = e-119
 Identities = 220/491 (44%), Positives = 317/491 (64%), Gaps = 12/491 (2%)

Query: 1   MLDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPASGLI 60
           +L+ +  G  TA    NL   +IG  +GT IG+LPG+G  + IA+++PIT+ LEP S LI
Sbjct: 3   LLNNLALGFVTASSLANLFFCLIGVLLGTLIGVLPGIGATATIAMLLPITFQLEPVSSLI 62

Query: 61  LMAGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGT 120
           ++AG+YYGA +GGST++ILIN PG SS+ VTA DGY MA+KG+AG ALA+AA  SF  GT
Sbjct: 63  MLAGIYYGAQYGGSTTAILINMPGESSSAVTAIDGYQMARKGKAGAALAIAAIGSFFAGT 122

Query: 121 LSAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLST 180
           +S  ++   AP L  ++L F +++YF+LM+VGL +  A A  G ++KA  M VLGL+L  
Sbjct: 123 VSTFLVAIFAPPLTAIALEFGAAEYFSLMVVGLVSSIALA-HGSIVKALAMVVLGLLLGL 181

Query: 181 VGIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKNI 240
           VG D   G  RFT G+ +  DG +F+ +A+  F + E L  +     +N       +  +
Sbjct: 182 VGTDIYSGTPRFTLGIREYADGLNFVAVAVGVFGIAEILRNL-----ENERTRSVLIAKV 236

Query: 241 GSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFGQ 300
            S+  +KE+ K      LR + +G   G+LPG GA +AAF +Y +E+ ++     EEFG 
Sbjct: 237 SSLMPSKEDFKAMIGPVLRGTAIGSALGILPGGGAILAAFASYTVEKRVS--KNPEEFGH 294

Query: 301 GSLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPDI 360
           G++ G+  PESANNA +  SF+PLLTLGIP +   A+M+GA+I  GI PGP +  + P +
Sbjct: 295 GAVAGVAGPESANNAGAQTSFIPLLTLGIPANPVMALMIGAMIIQGIVPGPNVATEQPAL 354

Query: 361 FWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMDVY 420
           FW +I SM++GN++L+ILNLPLI    KLL VP  VL P+I+ F   GVY V+ N  D+Y
Sbjct: 355 FWGIIASMWIGNLMLVILNLPLIGLWVKLLTVPYYVLFPIIMAFCAIGVYSVNSNVFDLY 414

Query: 421 VMILVA-MGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPI--TL 477
            +     +G + ++L   P APLLLGF+LG L+EENLRRA+I++ G+ +    RPI  TL
Sbjct: 415 AVAFFGFIGYVLVKLRCEP-APLLLGFVLGPLLEENLRRAMILSRGDPTTFVTRPISATL 473

Query: 478 AFTVLAIVTLL 488
            F  LA++ ++
Sbjct: 474 LFIALAVLIIV 484