Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., arabinose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  162 bits (411), Expect = 8e-45
 Identities = 99/310 (31%), Positives = 166/310 (53%), Gaps = 22/310 (7%)

Query: 23  LFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVGLAAV 82
           +F+L A+ +    +FLS  N+  +    S   I A  +   + +   DLS G  +  A V
Sbjct: 32  IFVLSALFI---DNFLSPLNMRGLGLAISTVGIAACTMLFCLASGHFDLSVGSVIACAGV 88

Query: 83  ISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIATLGT 142
           ++  +++  D+V           +L V  ++ + G ++GL+NG+++A L++   IATL T
Sbjct: 89  VAGIVIRDTDSV-----------VLGVSAALAM-GLVVGLINGIVIAKLRINALIATLAT 136

Query: 143 MIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIFMWVLW 202
           M IV G+  ++ +      +   DE F  F  G +              ++  +F   L 
Sbjct: 137 MQIVRGLAYIFSNG---KAVGVMDEGFFVFGNGQL----LGVPVPIIITVLCFVFFGWLL 189

Query: 203 NKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSATNNLG 262
           N T +G+N  A+GGN EAA ++GVNV  T + ++A+ G+  A  G++ A R+ S    +G
Sbjct: 190 NYTTYGRNTMAIGGNQEAALLAGVNVDRTKIIIFAVHGLIGALAGVILASRMTSGQPMIG 249

Query: 263 FLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYIIKGSII 322
             +EL  I+ACV+GGVS +GG+G I  V+ GVLI  +I   M    +  ++QY+I+GSI+
Sbjct: 250 QGFELTVISACVLGGVSLSGGIGMIRHVIAGVLILAIIENAMNLKNIDTFYQYVIRGSIL 309

Query: 323 IFAVALDSMK 332
           + AV +D MK
Sbjct: 310 LLAVIIDRMK 319