Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  184 bits (466), Expect = 4e-51
 Identities = 112/311 (36%), Positives = 170/311 (54%), Gaps = 19/311 (6%)

Query: 23  LFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVGLAAV 82
           L ++  ++++   +FL+  NLSNI  Q S+  IIA+G+  +I+T G DLS G  + L+  
Sbjct: 38  LVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMALSGT 97

Query: 83  ISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIATLGT 142
           ++A L+ +           G  P LA+   + LIG   G+ NG+ VAYL + P I TL T
Sbjct: 98  LTAGLMVA-----------GLPPGLAIGAGM-LIGVAFGIGNGLFVAYLHMPPIIVTLAT 145

Query: 143 MIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIFMWVLW 202
           M I  G+  +Y D     PI+G  + F  F +  +    F         ++  +  +VL 
Sbjct: 146 MGIARGLGLMYTDGY---PISGLPDWFAFFGRESL----FGIQVPILIMLLTYLVAYVLL 198

Query: 203 NKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSATNNLG 262
             T  G+ I+A+GGN EA ++SGV      L VY +SG+  A  G++   R+ S   N G
Sbjct: 199 QHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAG 258

Query: 263 FLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYIIKGSII 322
             +ELDAIAA V+GG S AGG G I G + G ++  V+N G+  +GVSPY Q +IKG II
Sbjct: 259 VSFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGII 318

Query: 323 IFAVALDSMKY 333
           + A+ +   ++
Sbjct: 319 LLAIFISRQRH 329