Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., Fructose ABC transporter, permease component FrcC from Variovorax sp. SCN45

 Score =  162 bits (409), Expect = 1e-44
 Identities = 110/322 (34%), Positives = 162/322 (50%), Gaps = 19/322 (5%)

Query: 13  HLKEGAIYAVLFILLAIIVI--QEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTD 70
           H+  GA+   L +L A I    Q   FL+  NLS IL Q  V  +IA+G   +I+T G D
Sbjct: 8   HIPWGALGPWLALLGACIFFATQSDRFLTGGNLSLILQQVMVVGVIAIGQTLIILTAGID 67

Query: 71  LSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAY 130
           LS G  + L  +I          ++K    LG +P    I+    +  + GL+NG++V  
Sbjct: 68  LSCGMVMALGGII----------MSKFATELG-LPAPVAILCGIGVTTLFGLLNGLLVTR 116

Query: 131 LKVTPFIATLGTMIIVYGINSLYYDSVGASPI-AGFDERFTTFTQGFIRIGDFRFSYITF 189
           +K+ PFI TLGT+ I + I  LY  S   + +  G     TTF+     IG+   ++   
Sbjct: 117 IKLPPFIVTLGTLNIAFAITQLYSSSQTITDLPGGLTGLGTTFS-----IGNAEVAWGAV 171

Query: 190 YAIIAIIFMWVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGML 249
             ++     W +  +T  G++I+AVG N EA ++ G+     LL VY  +GV Y    +L
Sbjct: 172 LMLVLYGLAWFVLRETAAGRHIYAVGNNAEATRLVGIPTQRVLLGVYVAAGVLYGIASLL 231

Query: 250 EAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGV 309
              R G    N G    LDAI A V+GG S  GG G + G + GVLI  V   G+T +GV
Sbjct: 232 SVARTGVGDPNAGQTENLDAITAVVLGGTSLFGGRGIVLGSLIGVLIVGVFRNGLTLMGV 291

Query: 310 SPYWQYIIKGSIIIFAVALDSM 331
           S  +Q ++ G ++I AV  D +
Sbjct: 292 SSIYQVLVTGVLVILAVTADQL 313