Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  190 bits (483), Expect = 4e-53
 Identities = 114/317 (35%), Positives = 173/317 (54%), Gaps = 16/317 (5%)

Query: 14  LKEGAIYAVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSA 73
           +++ ++ A+LF L+ ++    P+F ++ NL NIL Q+SV  IIA+G+  +I+T G DLS 
Sbjct: 30  IEQKSLIALLF-LVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSV 88

Query: 74  GRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKV 133
           G  + L    +ATL+              E+P+L  + +  L GA +G ++G+I+A  KV
Sbjct: 89  GSVLALCGAFAATLVAM------------EVPVLVAVPTALLAGAALGAISGIIIAKGKV 136

Query: 134 TPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAII 193
             FIATL TM ++ G+  +Y D  G     GF +   TF   F            +  ++
Sbjct: 137 QAFIATLVTMTLLRGVTMVYTD--GRPISTGFTDTADTFAW-FGTGYTLGIPVPVWLMVV 193

Query: 194 AIIFMWVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGR 253
                W L N T FG+ ++AVGGN  A ++SG+NV    + VYA+ G+  A  G++   R
Sbjct: 194 VFAGAWYLLNHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSR 253

Query: 254 IGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYW 313
           + SA    G  YELDAIAA V+GG S  GG G I G + G LI   +N  +  + VS Y+
Sbjct: 254 LSSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYY 313

Query: 314 QYIIKGSIIIFAVALDS 330
           Q I K  +I+ AV +D+
Sbjct: 314 QMIAKAVVILLAVLVDN 330