Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  192 bits (488), Expect = 1e-53
 Identities = 125/338 (36%), Positives = 186/338 (55%), Gaps = 24/338 (7%)

Query: 1   MTMDAVKS---FAIKHLKEGAIYAVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIA 57
           MT  AV     F    L E      L +L+AI+    P+F ++ NL NIL Q+SV  I+A
Sbjct: 1   MTTQAVSGRRYFTKAWLLEQKSLIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMA 60

Query: 58  LGVAGLIVTQGTDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIG 117
           +G+  +I+T G DLS G  + L   ++A+++              E+  L  + +   +G
Sbjct: 61  VGMTLVILTSGIDLSVGSLLALTGAVAASIVGV------------EVNALVAVAAALALG 108

Query: 118 AIIGLVNGVIVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPI-AGFDERFTTFTQGF 176
           A IG V GVIVA  +V  FIATL  M+++ G+  +Y D    SP+  GF +    F  G+
Sbjct: 109 AAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMVYTDG---SPVNTGFTDNADLF--GW 163

Query: 177 IRIGDFRFSYITFYAIIAIIFM--WVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLK 234
             IG       T   I+AI+F+  W + + T  G+ I+A+GGN  A ++SG++V    + 
Sbjct: 164 FGIGR-PLGVPTPVWIMAIVFIAAWYMLHHTRLGRYIYALGGNEAATRLSGISVSKVKII 222

Query: 235 VYALSGVFYAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGV 294
           VY+L G+  +  G++E  R+ SA    G  YELDAIAA V+GG S AGG G I G + G 
Sbjct: 223 VYSLCGLTASLAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGA 282

Query: 295 LIFTVINYGMTYIGVSPYWQYIIKGSIIIFAVALDSMK 332
           LI   +N G+  +GVS Y+Q I+K  +I+ AV +D+ K
Sbjct: 283 LILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKK 320