Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., ribose ABC transporter permease protein (NCBI) from Escherichia coli BW25113

 Score =  193 bits (491), Expect = 4e-54
 Identities = 122/334 (36%), Positives = 183/334 (54%), Gaps = 21/334 (6%)

Query: 2   TMDAVKSFAIKHLKEGAIYAVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVA 61
           T+   + F    L E      L +L+AI+    P+F ++ NL NIL Q+SV  I+A+G+ 
Sbjct: 5   TVSGRRYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMT 64

Query: 62  GLIVTQGTDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIG 121
            +I+T G DLS G  + L   ++A+++              E+  L  + +   +GA IG
Sbjct: 65  LVILTSGIDLSVGSLLALTGAVAASIVGI------------EVNALVAVAAALALGAAIG 112

Query: 122 LVNGVIVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPI-AGFDERFTTFTQGFIRIG 180
            V GVIVA  +V  FIATL  M+++ G+  +Y      SP+  GF E    F  G+  IG
Sbjct: 113 AVTGVIVAKGRVQAFIATLVMMLLLRGVTMVY---TNGSPVNTGFTENADLF--GWFGIG 167

Query: 181 DFRFSYITFYAIIAIIFM--WVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYAL 238
                  T   I+ I+F+  W + + T  G+ I+A+GGN  A ++SG+NV    + VY+L
Sbjct: 168 R-PLGVPTPVWIMGIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSL 226

Query: 239 SGVFYAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFT 298
            G+  +  G++E  R+ SA    G  YELDAIAA V+GG S AGG G I G + G LI  
Sbjct: 227 CGLLASLAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILG 286

Query: 299 VINYGMTYIGVSPYWQYIIKGSIIIFAVALDSMK 332
            +N G+  +GVS Y+Q I+K  +I+ AV +D+ K
Sbjct: 287 FLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKK 320