Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

 Score =  162 bits (409), Expect = 1e-44
 Identities = 107/320 (33%), Positives = 172/320 (53%), Gaps = 24/320 (7%)

Query: 19  IYAVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVG 78
           ++A LF+  AI V    +F++++ L   ++ S +   +A G+   + +   DLS    + 
Sbjct: 30  VFAALFLACAIFVPNFATFINMKGLGLAISMSGM---VACGMLFCLASGDFDLSVASVIA 86

Query: 79  LAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIA 138
            A V +A ++   +++         I +LA +    L+G I GLVNG ++A LK+   I 
Sbjct: 87  CAGVTTAVVINMTESL--------WIGVLAGL----LLGVISGLVNGFVIARLKINALIT 134

Query: 139 TLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIR-IGDFRFSYITFYAIIAIIF 197
           TL TM IV G+  +  D      +   DERF  FT G+   +G     ++T   +  +I 
Sbjct: 135 TLATMQIVRGLAYIISDG---KAVGIEDERF--FTLGYANWLGLPAPIWLT---VACLIL 186

Query: 198 MWVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSA 257
              L N+T FG+N  A+GGN EAA+++GV V  T + ++ LSG+  A  G++ A R+ S 
Sbjct: 187 FGFLLNRTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAAAGIILASRMTSG 246

Query: 258 TNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYII 317
                  YEL  I+ACV+GGVS  GG+G I+ VV G+LI   +   M  + +SP+ QY++
Sbjct: 247 QPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFSQYVV 306

Query: 318 KGSIIIFAVALDSMKYANKK 337
           +G I++ AV  D  K   K+
Sbjct: 307 RGLILLAAVIFDRYKQKAKR 326