Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., ribose ABC transporter permease from Escherichia coli ECRC101

 Score =  200 bits (508), Expect = 5e-56
 Identities = 112/314 (35%), Positives = 176/314 (56%), Gaps = 19/314 (6%)

Query: 19  IYAVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVG 78
           I  +L +++A+     P+F +  NL NI  Q+S+ +++A G+  +I+T G DLS G  +G
Sbjct: 23  ILPILILIVAVFGFITPNFFTESNLLNITRQASINIVLAAGMTFIILTGGIDLSVGSILG 82

Query: 79  LAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIA 138
             AV +  +  S        P    + I A +    ++G ++GL NG +VA+  + PFI 
Sbjct: 83  TTAVAAMVVSLS--------PEFAMLSIPAAL----MLGLLLGLFNGALVAFAGLPPFIV 130

Query: 139 TLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIFM 198
           TLGT   + G   L  D    + +   +  F      ++        ++   A+  I+  
Sbjct: 131 TLGTYTALRGAAYLLADG---TTVINSNINFEWIGNNYLG----PVPWLVVIALAVIVVC 183

Query: 199 WVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSAT 258
           W +  +T  G +I+AVG N +AA+++G+ V L LL VY +SG+    GG++ A R+ SA 
Sbjct: 184 WFILRRTTLGVHIYAVGSNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGIMSASRLYSAN 243

Query: 259 NNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYIIK 318
            NLG  YELDAIAA ++GG SF GG+G+I G + G LI   +N GMT +GVS +WQ +IK
Sbjct: 244 GNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQLVIK 303

Query: 319 GSIIIFAVALDSMK 332
           G++II AV +D  +
Sbjct: 304 GAMIIIAVLIDKYR 317