Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., D-allose transport system permease protein AlsC from Azospirillum sp. SherDot2

 Score =  169 bits (428), Expect = 9e-47
 Identities = 104/323 (32%), Positives = 168/323 (52%), Gaps = 15/323 (4%)

Query: 14  LKEGAIYAVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSA 73
           ++ G +   L   L +  +    FL+  NL N++ QS   V+++LG   +++T G DL+ 
Sbjct: 33  IRLGVLPFFLAAALIVFALASDRFLTADNLVNVMRQSVYLVLVSLGQMMVLITGGFDLAV 92

Query: 74  GRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCL---IGAIIGLVNGVIVAY 130
           G  V L +V+SA  + ++    ++FP   ++PIL + +       + A++GL NG  VA 
Sbjct: 93  GATVALTSVVSALAMAAL---GQMFP---DVPILVIALGALAGFAVAALVGLANGAGVAL 146

Query: 131 LKVTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFY 190
             V+PFI TLG   +  G  SL+    G  P++G    F     GF R        +   
Sbjct: 147 FGVSPFIMTLGVSSVAAG-GSLFL--TGGVPVSGLPAEFADLF-GFGRWLGIPVPVLV-- 200

Query: 191 AIIAIIFMWVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLE 250
           A +A+   WV+  +T  G +++AVGGN +AAK+S ++   TL+  Y L  +  A  G+L 
Sbjct: 201 AAVAVAIAWVVMTRTRTGAHLYAVGGNIKAAKLSAIHTGRTLIVAYVLCALIAALTGLLL 260

Query: 251 AGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVS 310
             R+ S   NLG    L++IAACV+ GVS  GG+G +  VV G     ++  GM    + 
Sbjct: 261 TARVESGEANLGGTLALESIAACVIAGVSLRGGIGRVETVVLGAFFIVLVQNGMNLAQIG 320

Query: 311 PYWQYIIKGSIIIFAVALDSMKY 333
            Y Q ++ G ++I AV  D ++Y
Sbjct: 321 SYLQMVLLGGLLILAVIFDQIRY 343