Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  207 bits (526), Expect = 4e-58
 Identities = 123/317 (38%), Positives = 186/317 (58%), Gaps = 14/317 (4%)

Query: 21  AVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVGLA 80
           A+++ +L  I I +   L+ + L+ ++ Q SV  IIA+GV  +I+T G DLS+G  VGL 
Sbjct: 36  ALVYEILGWIFIGQSFLLNQQRLTIMILQVSVIGIIAVGVTQVIITGGIDLSSGSVVGLT 95

Query: 81  AVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIATL 140
           A+++A++ QS      ++P L ++P    +    L GA+ G +NG ++A  K+ PFIATL
Sbjct: 96  AMLAASVGQSSTWPRALYPGLTDLPFFIPLAVGILAGALAGFINGQLIARTKIPPFIATL 155

Query: 141 GTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAIIAIIFMWV 200
           G M+   G++  Y       PI+G  + FT     FI  G +    +  + ++AIIF   
Sbjct: 156 GMMVTARGLSKWY---TKGQPISGLTDGFT-----FIGTGVWP---VVVFLVVAIIFHVA 204

Query: 201 LWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLEAGRIGSATNN 260
           L   T +GK  +A+G N +AA+VSG+N+   L+KVYA++G+     G++ A R  +A   
Sbjct: 205 L-RYTRYGKFTYAIGANQQAARVSGINIEAHLIKVYAIAGLLAGLAGVVTAARAQTAQAG 263

Query: 261 LGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIGVSPYWQYIIKGS 320
           +G +YELDAIAA V+GG S AGG G I G V G +I  V+  G T++ V  Y+Q I+KG 
Sbjct: 264 MGVMYELDAIAAAVIGGTSLAGGAGRITGTVIGTIILGVMTSGFTFLRVDAYYQEIVKGL 323

Query: 321 IIIFAVALDSMKYANKK 337
           II+ AV  D   Y  KK
Sbjct: 324 IIVAAVVAD--VYRQKK 338