Pairwise Alignments

Query, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  171 bits (433), Expect = 2e-47
 Identities = 108/343 (31%), Positives = 178/343 (51%), Gaps = 31/343 (9%)

Query: 7   KSFAIKH-----LKEGAIYAVLFILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVA 61
           K FA+       +++ A    LF L+A+      +F ++ N   I  Q +   ++ +G  
Sbjct: 9   KGFAVSDRQKDIIQKFAALGSLFALVAVFSATSNAFFTVNNGMTIALQVTSIALLGIGAT 68

Query: 62  GLIVTQGTDLSAGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIG 121
            +I+T G DLS G  + LA V++A  ++ +            +P+   ++   L G++ G
Sbjct: 69  CVIITGGIDLSVGSVLALAGVVAALAVKELG-----------MPVPIGMLLGILTGSLCG 117

Query: 122 LVNGVIVAYLKVTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQG----FI 177
           L+NG++V   K+ PFIATLG M+I  G+        GA  ++G  E F     G     +
Sbjct: 118 LINGLLVTRFKLPPFIATLGMMLIARGVA---LQITGARAVSGLGESFGELGNGALFRIV 174

Query: 178 RIGDFRFSYITF----YAIIAIIFMWV----LWNKTVFGKNIFAVGGNPEAAKVSGVNVP 229
            IGD  F  + F    Y +I ++ + +    + N+++ G++I+AVG N +AA++SGVNV 
Sbjct: 175 TIGDDGFPNVVFPGIPYPVILMVVIALAVSFMLNRSILGRHIYAVGSNADAARLSGVNVA 234

Query: 230 LTLLKVYALSGVFYAFGGMLEAGRIGSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAG 289
                 Y LSG      G +   R+ +A  N G +YELDAIA+ V+GG S  GGVG+I+G
Sbjct: 235 RVTNFTYILSGTLAGLTGCVLMSRLVTAQPNEGVMYELDAIASAVIGGTSLIGGVGTISG 294

Query: 290 VVTGVLIFTVINYGMTYIGVSPYWQYIIKGSIIIFAVALDSMK 332
              G  +  ++  G+   GVS + Q II G +I+  V +D ++
Sbjct: 295 TAIGAFVIGILRNGLNMNGVSAFTQQIIIGLVILVTVWIDQLR 337