Pairwise Alignments

Query, 324 a.a., galactose/glucose ABC transporter substrate-binding protein MglB from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., D-ribose ABC transporter, substrate-binding component RbsB (from data) from Pseudomonas simiae WCS417

 Score = 73.2 bits (178), Expect = 8e-18
 Identities = 73/302 (24%), Positives = 133/302 (44%), Gaps = 23/302 (7%)

Query: 4   LTVLAMLSAGMGFGTQALADTT---IGFTIYKYDDNFMSVVR---QAIEKEAAADSNTRI 57
           + VLA  SA +   +    D     +G  +    + F   ++   +  +KE AAD +   
Sbjct: 12  VAVLAAASAALPLSSAFADDAAKPKVGLVMKSLANEFFVTMQDGAKTYQKEHAADFDMIT 71

Query: 58  LMNDSQNSQSMQNDQVDVMLARGVQALAINLVDPAAAPTIIQKAKIDDVPVVFYNKEPSA 117
               ++   S Q D V+ M+   V A+ I   D  A  T+++KA    + VV  +     
Sbjct: 72  NGIKNETDTSAQIDIVNQMILAKVNAIVIAPADSKALVTVLKKASDAGIKVVNIDNRLDP 131

Query: 118 EAMASYDKAF-YVGTDSKESGIIQGDLISAQWKANPAWDKNGDGVLQYVMLKGEPGHPDA 176
           + + S +    +VG D+++   + GD ++ Q  +    DK G       +++G P   +A
Sbjct: 132 DVLKSKNLDIPFVGPDNRKGSKLVGDYLAKQLASG---DKVG-------IIEGVPTTTNA 181

Query: 177 EARTTYSVQTINDNGIKTQELHMDTGMWDTAMAKDKMDAWLSGPNGSKIEVVIANNDGMA 236
           + RT      ++  G+K   +   +G W+    +    A LS      ++ ++A ND MA
Sbjct: 182 QQRTAGYKDAMDAAGMKI--VSTQSGNWEIDQGQKVASAMLS--EYPDLKALLAGNDNMA 237

Query: 237 MGAIEALRGAGQ--KIPVFGVDALAEALALIKSGDMAGTVLNDAQNQAKATFELARNLAN 294
           +GA+ A+R AG+  K+ V G D +     +++ G +  T    A  QA    + A  L  
Sbjct: 238 LGAVSAVRAAGKAGKVLVVGYDNIEAIKPMLQDGRVLATADQAAAQQAVFGIQNALKLVK 297

Query: 295 GK 296
           G+
Sbjct: 298 GE 299