Pairwise Alignments

Query, 324 a.a., galactose/glucose ABC transporter substrate-binding protein MglB from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score = 83.6 bits (205), Expect = 6e-21
 Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 27/277 (9%)

Query: 26  IGFTIYKYDDNFM-SVVRQAIEKEAAADSNTRILMNDSQNSQSMQNDQVDVMLARGVQAL 84
           +G  +Y     FM + VR+  E  A  D   ++ + D       QN+Q++ M+ +   A+
Sbjct: 31  VGAAVYGLKGQFMQNWVRELKEHPAVKDGTVQLTVFDGNYDALTQNNQIENMVTQRYDAI 90

Query: 85  AINLVDPAAAPTIIQKAKIDDVPVVFYNKEPSAEAMASYDKAFYVGTDSKESGIIQGDLI 144
               +D  A    ++ A  +DV V+  N + +  ++       YVG D  E G +Q    
Sbjct: 91  LFVPIDTKAGVGTVKAAMSNDVVVIASNTKVADASVP------YVGNDDVEGGRLQ---- 140

Query: 145 SAQWKANPAWDK-NGDGVLQYVMLKGEPGHPDAEARTTYSVQTINDNGIKTQELHMDTGM 203
                A    DK NG G    V+++G  G      R    ++ +  +    + +   T  
Sbjct: 141 -----AQAMVDKLNGKG--NVVIIQGPIGQSAQIDREKGELEVLGKHP-DIKIIEKKTAN 192

Query: 204 WDTAMAKDKMDAWLSG-PNGSKIEVVIANNDGMAMGAIEALRGAG---QKIPVFGVDALA 259
           WD A A    + WL+  P G  I  VIA ND MA+GA++AL+  G   + +PV  +D + 
Sbjct: 193 WDRAQALALTEDWLNAHPKG--INGVIAQNDDMALGAVQALKSHGLTSKDVPVTSIDGMP 250

Query: 260 EALALIKSGDMAGTVLNDAQNQAKATFELARNLANGK 296
           +A+   K  D   T L DAQ Q++   ++A     GK
Sbjct: 251 DAIQAAKK-DEVTTFLQDAQAQSQGALDVALRALAGK 286



 Score = 24.6 bits (52), Expect = 0.003
 Identities = 24/113 (21%), Positives = 39/113 (34%), Gaps = 13/113 (11%)

Query: 64  NSQSMQNDQ-----VDVMLARGVQALAINLVDPAAAPTIIQKAKIDDVPVVFYNKEPSAE 118
           N    QND      V  + + G+ +  + +      P  IQ AK D+V     + +  ++
Sbjct: 214 NGVIAQNDDMALGAVQALKSHGLTSKDVPVTSIDGMPDAIQAAKKDEVTTFLQDAQAQSQ 273

Query: 119 AMASYDKAFYVGTDSKESGIIQGDLISAQWKANPAWDKNGDGVLQYVMLKGEP 171
                      G D K   +I        W+      K GDG  +  +L   P
Sbjct: 274 GALDVALRALAGKDYKPQSVI--------WERYAKEVKWGDGTAKNYILPWVP 318