Pairwise Alignments

Query, 324 a.a., galactose/glucose ABC transporter substrate-binding protein MglB from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 73/322 (22%), Positives = 140/322 (43%), Gaps = 34/322 (10%)

Query: 2   RKLTVLAMLSAGMGFGTQALADTTIGFTIYKYDDNFMSVVRQAIEKEAAADSNTRILM-- 59
           R L ++A L     F   A  + TIG  IY     + + VRQ ++ +AA DS+ ++ +  
Sbjct: 9   RNLLLMATLLGSALFARAAEKEMTIG-AIYLDTQGYYAGVRQGVQ-DAAKDSSVQVQLIE 66

Query: 60  NDSQNSQSMQNDQVDVMLARGVQALAINLVDPAAAPTIIQKAKIDDVPVVFYNKEPSAEA 119
            ++Q   S ++  VD ++AR V A+ ++ V    +   +++A    +PV+ YN   + + 
Sbjct: 67  TNAQGDISKESTFVDTLVARNVDAIILSAVSENGSSRTVRRASEAGIPVICYNTCINQKG 126

Query: 120 MASYDKAFYVGTDSKESGIIQGDLISAQWKANPAWDKNGDGVLQ----YVMLKGEPGHPD 175
           +  Y  A+ VG D  E G   G+  +  + AN   D+    V+      V ++   G  +
Sbjct: 127 VDKYVSAYLVG-DPLEFGKKLGNAAADYFIANKI-DQPKIAVINCEAFEVCVQRRKGFEE 184

Query: 176 AEARTTYSVQTINDNGIKTQELHMDTGMWDTAMAKDKMDAWLSGPNGSKIEVVIANNDGM 235
                    Q +          + +  + D A++  +    +S P+   +  ++  + G 
Sbjct: 185 VLKSRVPGAQIV---------ANQEGTVLDKAISVGE-KLIISTPD---LNAIMGESGGA 231

Query: 236 AMGAIEALRGAGQ--KIPVFGVDALAEALALIKSGDMAGTVLN-DAQNQAKATFELARNL 292
            +GA++A+R   Q  KI VFG D   E    +++  +   V++   +    A F     +
Sbjct: 232 TLGAVKAVRNQNQAGKIAVFGSDMTTEIAQELENNQVLKAVVDISGKKMGNAVFAQTLKV 291

Query: 293 ANGKPAAEGTQWTIENKVVRVP 314
            N +   E        KV++VP
Sbjct: 292 INKQADGE--------KVIQVP 305