Pairwise Alignments

Query, 1023 a.a., penicillin-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1049 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 1192 bits (3083), Expect = 0.0
 Identities = 610/1008 (60%), Positives = 765/1008 (75%), Gaps = 9/1008 (0%)

Query: 16   RAQKNKPRYW--LIAVLLIG-TAGGAALFHEMETSTLQSREISRYAAGLTYQVEPGASDK 72
            ++ + +  +W  +I +LL+   A G A + E  TS LQSRE S+ A+ LTY ++PG SD 
Sbjct: 26   KSPRQRRLWWRLIILILLVALVAIGVAAYDEFRTSELQSREFSKLASTLTYSLQPGPSDA 85

Query: 73   IAFPSYGPFDQRLGYVALPNIQERLLQRGFTIRQQVRFSDELQRYAQYGLYVPYTEKVQA 132
            I +P  GPFD+RLGY AL     RLL+R + I +QV+FS  L  Y  +GL+ PY EK+QA
Sbjct: 86   IIYPGDGPFDKRLGYSALGEFLPRLLKRDYLISEQVKFSPALMNYVDHGLFAPYIEKIQA 145

Query: 133  GLTLFDCRTEPVYQFRYPGNHYADFNAIPDLIVQSLLFIENRDLLSDKNPLVNPAVDWPR 192
            GL++ DCR + +YQ+ YP + Y DF AIP ++V SLLFIENRDLL  ++P  NPAVDWPR
Sbjct: 146  GLSITDCRGDTLYQYNYPQHLYPDFAAIPPVMVNSLLFIENRDLLDTQDPRNNPAVDWPR 205

Query: 193  FFKAALTQVGKALDLDGQSAGGSTLATQVEKYRHSEDGLTYSPQEKIRQMVSASVRAYRL 252
            F KAA +QV K L L GQSAGGSTLATQ+EKYRHS DGLT S  EKIRQM+SASVRAY+ 
Sbjct: 206  FAKAAYSQVAKYLALPGQSAGGSTLATQLEKYRHSPDGLTVSGAEKIRQMISASVRAYQG 265

Query: 253  GANTLEARKLVVWAYLNSVPLSAAPGYGEVHGLGDGLWVWFAADPERVNQLLDTRLNQSV 312
            G +T EAR+ +V  YLNSVPLSA PG+GEVHG+ +GL VW+ AD ++VNQ L+       
Sbjct: 266  GPDTTEARQRIVRDYLNSVPLSAVPGHGEVHGMAEGLRVWYGADFDQVNQALNATATDPQ 325

Query: 313  NLAEQGLALRQVVALMIAHRRPSYYLAVSGRPDLNALTDSHIRLFYREKMISKSLMDAAL 372
            ++A +GLALRQV++LMIA RRPS+YL+  GR +L  LTDSHIRL    K+I + L DAAL
Sbjct: 326  SMAARGLALRQVLSLMIAQRRPSHYLS-KGRVELAELTDSHIRLLAANKVIDQPLADAAL 384

Query: 373  NATLQFRDFVRQPAVTRINTNKGLLAARTHLSRQLGVSLYDLDRMDLSASTTLNFELQSE 432
             +   +RD+V QP +  I TNKG+  AR  LS  L   LYDLDR+DLSA++TL  +LQ +
Sbjct: 385  ASKAVYRDWVAQPTIVPIITNKGISLARNRLSAMLNRPLYDLDRLDLSATSTLQADLQLQ 444

Query: 433  VTRYLQKLANPEYAAQVGILGFRLLAAEKTADVRYSFTLFERTDEGFKVRVQTDNTNQPF 492
            V++YL+ LA+PE+AAQ+G++G RLL A+ T  V YSFTLFERT +G +VRVQTD+TNQPF
Sbjct: 445  VSQYLKNLADPEFAAQIGLIGERLLTAKTTDQVSYSFTLFERTADGSRVRVQTDSTNQPF 504

Query: 493  DLNEGSKLELGSTAKLRVLTTYLEIIAKLHSKYHDLSVMELRRHLVEAQDTLSVWSLEWL 552
            D+NEGSKLELGSTAKLRVLTTYLEIIA+LH KY      EL++  V   D ++ WSLEWL
Sbjct: 505  DINEGSKLELGSTAKLRVLTTYLEIIAELHDKYAGKPAAELKKVEVAELDRITQWSLEWL 564

Query: 553  -LTSPKRDLATMLEAALEREYSADPKERFFTGGGIHTFNNFRKEDDERIVTMRDALRESI 611
             L S  + L  ML+AALER+YSA+  E FFTGGG+H FNNFRKED+ R  T++DALRESI
Sbjct: 565  ALNSKNQSLDAMLDAALERKYSANTGEAFFTGGGMHVFNNFRKEDNNRNPTLKDALRESI 624

Query: 612  NLPFVRLMKDIERYTLYSEGY-RAQLMKDDKDPRRMEYLRQFADKEGRAYLLRFWRKYKD 670
            NLPF+RLM+D+ RY  Y + Y R  L+KDD DPRR EYL +FADKEG  YL+RFW+KY+ 
Sbjct: 625  NLPFIRLMRDLVRYVTYQQPYNRVPLLKDDADPRRQEYLARFADKEGTNYLMRFWKKYQR 684

Query: 671  KTTDERMATLLEGLKPSADRLAAVHRYLLPEASVSEFVRFMDDKLP--PITRDKLTDKQL 728
            KT+ +R+ T L+ ++ +  RLAAVHRYL PEAS   F  F+   L    +   KLTD +L
Sbjct: 685  KTSQQRLDTFLDSMRVTPQRLAAVHRYLFPEASQETFNAFVRAHLKGDKVVLGKLTDGRL 744

Query: 729  EKLYNKYGRGKYSLPDQGYIARVHPLELWLLGYLNEHHQASFSDVVAASSDKRQEVYSWL 788
             ++Y  YG GKY LPDQGYIA+VHPL+LWLLGYL ++  ++ ++++ AS  +RQEVY WL
Sbjct: 745  SEMYVAYGPGKYDLPDQGYIAKVHPLDLWLLGYLLKNPSSTLTEMINASRFERQEVYGWL 804

Query: 789  FKTRHRNARDSRVRTMLEVEAFTDIHQSWQRLGYPFDHLVPSLATALGSSGDRPAALSEL 848
            FK+RH+ ARDSR+RTM+E+EAF DIHQ W+R+GYPFDHLVPSLATA+GSSGDRPAALSEL
Sbjct: 805  FKSRHQGARDSRIRTMVEIEAFLDIHQRWKRVGYPFDHLVPSLATAIGSSGDRPAALSEL 864

Query: 849  MGIILNDGVRVPTKRINHLHFAQDTPFETEFTPVETQGVRVLPVEVARALRGALSQVVDS 908
            +GII NDGVR+PT RI+ LHFA +TP+ET+      +GVR+LPVEVARAL+GA+SQVVD+
Sbjct: 865  VGIIQNDGVRLPTLRIDTLHFAANTPYETKLITDPDRGVRILPVEVARALKGAMSQVVDA 924

Query: 909  GTARRISGVFKLPDGTPIVLGGKTGTGDNRLQTVNRAGTVVQSLARNRTATFVFYLGDRH 968
            GTARRISG FKL DGTP+V+GGKTGTGDNR+++    G ++ S + NRTATFVF+LGD H
Sbjct: 925  GTARRISGSFKLQDGTPLVMGGKTGTGDNRIESFGAGGRLIGSRSLNRTATFVFFLGDNH 984

Query: 969  FGTLTAYVAGSDSEKFTFTSALPVQVLKGMAPILSPYLAP-NEQECRP 1015
            FGTLTA+V G  +E F FTSALPVQVLKGMAPIL PYL P N  EC+P
Sbjct: 985  FGTLTAFVPGRTAEAFKFTSALPVQVLKGMAPILMPYLQPGNPNECKP 1032