Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  146 bits (369), Expect = 3e-40
 Identities = 83/234 (35%), Positives = 130/234 (55%), Gaps = 3/234 (1%)

Query: 1   MSNQPSLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPG 60
           +S +  + I++DD ++R +  +++   G +VT         E +     DLV+LD+MLPG
Sbjct: 5   VSPEGHILIVDDDAEIRRLAGKFLREHGHKVTAAQGAREMREAMAAGTVDLVILDIMLPG 64

Query: 61  ENGLTICRQIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMR 120
            +GL +CR IR      I+MLTA   D D +  LE+GADD++ KP  PR LLARI  ++R
Sbjct: 65  VSGLDLCRDIRRTSNVPIIMLTARGSDVDRIVGLELGADDYLAKPFNPRELLARIHAVLR 124

Query: 121 REERTS-ASADATHLLQFGGLLLNQSRRH-CELDGEVINLSDSEFDLLWLLASAADQVVS 178
           R   +  A+ +    L F G  L+  RR     +G +++LS  E+DLL        +V++
Sbjct: 125 RTRLSDPAAVNGGTCLTFSGWTLDTRRRELTNPEGAIVDLSTGEYDLLLTFLEHPQRVLT 184

Query: 179 REFLTKSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLFVPD 232
           R+ L  + +     G DR +D ++  LR+KL +    P+ + TVRG GY FVP+
Sbjct: 185 RDQLMDAAKNRIATGFDRAIDIQVSRLRRKL-ESHGGPEMVKTVRGTGYFFVPE 237