Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  161 bits (408), Expect = 9e-45
 Identities = 94/230 (40%), Positives = 136/230 (59%), Gaps = 3/230 (1%)

Query: 6   SLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPGENGLT 65
           +L I+EDD ++R +LA+++  +G+ V     G      +   +PD+V+LDLMLPGE+GL+
Sbjct: 5   TLLIVEDDREIRALLADFLGREGYGVLAAEDGAAMDRILASARPDMVILDLMLPGEDGLS 64

Query: 66  ICRQIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRREERT 125
           ICR++RA+    ILMLTA  DD D +  LEMGADD++ KP  PR LLARIR ++RR + T
Sbjct: 65  ICRRLRARGGMPILMLTAKGDDVDRIVGLEMGADDYLPKPFNPRELLARIRAVLRRADGT 124

Query: 126 SAS-ADATHLLQFGGLLLN-QSRRHCELDGEVINLSDSEFDLLWLLASAADQVVSREFLT 183
            A        + F G + +  +R   E DG +++L+ +EF+LL        +V+SR+ L 
Sbjct: 125 LAEPTPRNRRVAFAGFVADLDARSVAEADGPLLDLTSAEFELLACFLERPKRVLSRDQLL 184

Query: 184 KSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRII-TVRGKGYLFVPD 232
              RG   D  DRT+D  +  LR+KL   S     +I TVR  GYL   D
Sbjct: 185 DWTRGRSADPFDRTIDVSVSRLRRKLSAVSEEAALLIKTVRNGGYLLTAD 234