Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  150 bits (379), Expect = 2e-41
 Identities = 86/231 (37%), Positives = 132/231 (57%), Gaps = 2/231 (0%)

Query: 1   MSNQPSLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPG 60
           M   P + +++D  ++RE+LA+Y+T  GF+V+  + G    +Q+     DLV+LD+M+PG
Sbjct: 1   MERTPHILVVDDHREIRELLAKYLTRNGFRVSVASGGVDMRQQMRTGTFDLVVLDIMMPG 60

Query: 61  ENGLTICRQIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMR 120
           E+GLT+CRQ+R      +++LTA  ++ D +  LE+GADD+V KP  PR LLARIR ++R
Sbjct: 61  EDGLTLCRQLRQASDIPVVLLTAVAEETDRIVGLELGADDYVTKPFNPRELLARIRAILR 120

Query: 121 REE-RTSASADATHLLQFGGLLLNQSRR-HCELDGEVINLSDSEFDLLWLLASAADQVVS 178
           R +  T A      L +F    L+  RR   +  G  + L  +EF LL    +    V+S
Sbjct: 121 RAQGPTRAQQGDPALYRFDRWQLDPGRRVLLDETGSEVRLGSAEFRLLLAFVTRPSVVLS 180

Query: 179 REFLTKSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGYLF 229
           R+ L     G      DR++DN +  LR+++  D   P  I TV G GY+F
Sbjct: 181 RDQLLDITAGRPAQVFDRSIDNLVSRLRRRIERDPQNPTLIKTVWGDGYVF 231