Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  148 bits (373), Expect = 1e-40
 Identities = 91/227 (40%), Positives = 131/227 (57%), Gaps = 6/227 (2%)

Query: 6   SLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQP-DLVLLDLMLPGENGL 64
           S+ +++DD ++RE+L  Y++  GFQV     G T   Q +   P DLV+LD+MLP E+G 
Sbjct: 7   SILLVDDDQEIRELLQTYLSRAGFQVRGVPDG-TGFRQAMNEAPCDLVILDVMLPDEDGF 65

Query: 65  TICRQIRA---QFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMRR 121
           ++CR IR    Q    I+MLTAS D+ D V  LE+GADD++ KP  PR L ARI+ L+RR
Sbjct: 66  SLCRWIRQHPRQAQVPIIMLTASSDEADRVIGLELGADDYIGKPFSPRELQARIKALLRR 125

Query: 122 EERTSASADATHLLQFGGLLLNQ-SRRHCELDGEVINLSDSEFDLLWLLASAADQVVSRE 180
            +     +    +L F    L+  S R   +DGE + LS ++F LL L      Q++ R+
Sbjct: 126 CQFGQERSSGGEVLVFDEWRLDMISHRLFHVDGEEVILSGADFALLKLFLDHPQQILDRD 185

Query: 181 FLTKSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRIITVRGKGY 227
            +  + RG +   LDR VD  +  LR++L D    P+ I TVRG GY
Sbjct: 186 TIGNATRGRDLMPLDRIVDMAVSRLRQRLRDTEKPPRLIRTVRGSGY 232