Pairwise Alignments

Query, 234 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  150 bits (379), Expect = 2e-41
 Identities = 85/236 (36%), Positives = 144/236 (61%), Gaps = 10/236 (4%)

Query: 1   MSNQPSLYIIEDDTKLREMLAEYMTNQGFQVTTFATGETAPEQILLNQPDLVLLDLMLPG 60
           M+ Q  L I++DD ++R++L +Y+++ GFQV+T A G+    ++ LN  DL++LDLMLPG
Sbjct: 1   MAKQDHLLIVDDDPQIRQLLCDYLSDAGFQVSTAADGKEMRRRLALNVIDLIVLDLMLPG 60

Query: 61  ENGLTICRQIRAQFLGKILMLTASDDDFDHVAALEMGADDFVNKPIKPRVLLARIRMLMR 120
           E+GL++CR++R      ++MLTA     D +  LE+GADD++ KP  PR LL RI++++R
Sbjct: 61  EDGLSLCRELRVNSNTPVVMLTAKGSLIDRIVGLEIGADDYLPKPFDPRELLVRIKVVLR 120

Query: 121 REER--TSASADATHLLQFGGLLLN-QSRRHCELDGEVINLSDSEFDLLWLLASAADQVV 177
           R +     A  D    ++F G  L+ ++R+    +G V++L +S++ +L LL    ++ +
Sbjct: 121 RVQSFPDRARLDEAPSIRFAGWQLDTRARQLLSPEGVVVSLGNSDYRVLRLLLQHPNRPL 180

Query: 178 SREFLTKSLRGIEYDGLDRTVDNKIVTLRKKLCDDSSTPKRII-TVRGKGYLFVPD 232
           SR+FL   +   +    DR++D  +  LR +L      P  +I TVR +GY+   D
Sbjct: 181 SRDFLLNHVFDKDSTPFDRSIDVCVSRLRSQL------PANVIKTVRNEGYMLTAD 230